Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00416 ATGTCTCGTGCTACAGCGGCACCAACACTACCACCCAATGGAGCAATGTCATTGACAACACCGCAACTACCTCCCGTGGCGGCGGAAGACAGGTACCCTTCCGTCGATCAATCCACGGAGCTCGTTCAAGTCCCTCATAAAAAATCTGATCTTTCTGCCTCTCCTTCCCTCGGTGATCAGCTTTTTAAGCGAGTCGGAGATATTCAAAACGACGATGACCACAACTCCTCTTCTCGTCTGCCCCATCACGTTCTTAATCTCTCCACCTGTACTTCACCTTCTACTTACCCCTTTGTCCTTTCTTTTAAGAATCTGACATACAGTGTAAAAGTTCGTAGGAAAATCATTACTCTTCCGCAATGTTTCAACAAGACCAACGTTGCTACCTTGAGTTCGACAAGGTTCGAGGTCGACGACGACGGCAGCATGGGTGACCGTGAGAGTCACCGCGAGTCGACAGAAATCAACTGTACCAAGGTACTGCTGAATGATATTTCTGGAGAAGCAATAGAAGGAGAAATCATGGCGGTTCTTGGTGCAAGTGGGTCAGGCAAGTCTACCCTCATTGATGCTCTTGCTGATCGTATTTCAAAGGACAGTTTGAAGGGTACCTTGACTTTGAATGGAGAGGAATTGGAGTCTAAGCTTTTGAAGGTAATCTCAGCTTATGTTATGCAAGATGACCTTCTCTTTCCCATGCTCACAGTGCAAGAGACACTCATGTTCTCTGCTGAGTTTAGACTTCCACGGTCTCTCTCCAAAACCAAGAAGAAAGCCAGAGTTCAAGCTCTTATTGAACAATTAGGTTTACACAATGCAGCCAACACTGTCATCGGTGATGAAGGTCATCGCGGTGTCTCGGGCGGTGAGCGTCGTCGTGTATCAATTGGAATCGACATCATCCATGATCCGATATTGCTATTCCTCGACGAACCCACCTCAGGGCTCGACTCAACCAGTGCGTTCATGGTCGTCCAAGTCTTACAGAGGATTGCTCAGAGCGGTAGCATTGTGATCATGTCCGTACACCAACCCAGTTACAGAATTCTCAGCGTGTTGGACCGTTTGATTTTTCTCTCAAATGGCCAAACTGTTTACAGTGGTTCACCAGGTAACCTTCCCATCTTCTTCGCTGATTTTGGGCATCCAATACCAGAGAACGAAAATAAGACAGAATTCGCTCTTGACCTAATCCACGAGCAGGAAGAGTCTCCTGGTGGAACCAAAAGATTAGTAGAGTTCAACAAATCATGGCAAGCCAATATTCTCTCGAGAAATATGCGAACAGATCATTACAGTTCTCCCAATGGACACAAAGTTTCACTCAGAGACGCCATCAGAGCAAGCATTTCAAGAGGTAAATTAGTATCTGGAGCACCCAATAGCCCCAATATCAGTTCATCAATGCAAAGTTTTGCCAATCCATTTTGGATCGAAATAGCTGTGATTGCCAAACGTTCCTTAAAAAACTCGCGCAGAATGCCAGAATTGTTTGGTGTAAGATTCACTGCAATTCTTGTGACAGGATCTATCTTAGCGACAATCTTTTTGCATTTAGATAATTCACCAAGAGGAGCTCAAGAACGAGTAGGGTTCTTTGCTTTTGCTATGTCAACTACGTACTACACTTGCGCTGAGGCCTTACCCGTTTTTCTTCAAGAGCGATACATATTCATGAGGGAAACAGCTTACAATGCCTACCGTCGCTCGTCTTATGTCTTAGCTAGTTCTATCCTATCGATGCCTTCTATAGTAATCCTCTCTGCTGTATTTGCTGTGATTACATTTTGGGCAGTAGGCCTTGCCGGTGGACTATCTGGGTTCTTATTCTACTTCTTGACCATGGTAGCTTCCTTTTGGGCAGGAAGTTCATTTGTGACATTCCTCTCTGGCATAGTATCTCATGTGATGTTGGGTTACGTAGTGGTGGTTGCATTCTTAGCTTACTTTCTTTTGTTCAGTGGGTTCTTCATTACCAGGGATAGAATCCCTCCTTATTGGATTTGGTTTCACTACTTGTCACTGGTGAAGTATCCATATGAAGCTGTTATGAGAAACGAGTTTGATGCACAGCCAGTGCAATGTTATGTGAGAGGGGTTCAGATGTTTGATAACACTCCACTTGGTGATGTACCTACGGCTGTGAAGTTGAGTCTGCTCAAGAGTATGAGCAATACATTAGGCATGAACATTACGAGCTCAACTTGTGTGATGACAGGAGTAGATATTCTGAGGCAGCAGGGTATTACAGACTTGAACAAATGGAATTGCTTGTGGATTACGATTGCTTGGGGTTTTTTCTTTAGAATTCTATTCTATTTTTCTCTGTTGATTGGGAGCAAGAATAAGAGAAGATAG 2358 0.4436 MSRATAAPTLPPNGAMSLTTPQLPPVAAEDRYPSVDQSTELVQVPHKKSDLSASPSLGDQLFKRVGDIQNDDDHNSSSRLPHHVLNLSTCTSPSTYPFVLSFKNLTYSVKVRRKIITLPQCFNKTNVATLSSTRFEVDDDGSMGDRESHRESTEINCTKVLLNDISGEAIEGEIMAVLGASGSGKSTLIDALADRISKDSLKGTLTLNGEELESKLLKVISAYVMQDDLLFPMLTVQETLMFSAEFRLPRSLSKTKKKARVQALIEQLGLHNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVQVLQRIAQSGSIVIMSVHQPSYRILSVLDRLIFLSNGQTVYSGSPGNLPIFFADFGHPIPENENKTEFALDLIHEQEESPGGTKRLVEFNKSWQANILSRNMRTDHYSSPNGHKVSLRDAIRASISRGKLVSGAPNSPNISSSMQSFANPFWIEIAVIAKRSLKNSRRMPELFGVRFTAILVTGSILATIFLHLDNSPRGAQERVGFFAFAMSTTYYTCAEALPVFLQERYIFMRETAYNAYRRSSYVLASSILSMPSIVILSAVFAVITFWAVGLAGGLSGFLFYFLTMVASFWAGSSFVTFLSGIVSHVMLGYVVVVAFLAYFLLFSGFFITRDRIPPYWIWFHYLSLVKYPYEAVMRNEFDAQPVQCYVRGVQMFDNTPLGDVPTAVKLSLLKSMSNTLGMNITSSTCVMTGVDILRQQGITDLNKWNCLWITIAWGFFFRILFYFSLLIGSKNKRR* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00416 785 Gene3D - 152 374 IPR027417 -
Pte15g00416 785 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 373 IPR027417 -
Pte15g00416 785 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 143 386 IPR003439 GO:0005524
Pte15g00416 785 Pfam ABC-2 type transporter 480 688 IPR013525 GO:0016020|GO:0140359
Pte15g00416 785 MobiDBLite consensus disorder prediction 1 20 - -
Pte15g00416 785 SMART AAA_5 171 363 IPR003593 GO:0016887
Pte15g00416 785 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 76 771 - -
Pte15g00416 785 MobiDBLite consensus disorder prediction 1 28 - -
Pte15g00416 785 Pfam ABC transporter 162 314 IPR003439 GO:0005524
Pte15g00416 785 FunFam ABC transporter G family member 6 150 377 - -
Pte15g00416 785 ProSitePatterns ABC transporters family signature. 286 300 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00416 Pte-Chr15 2938889 2941246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00416 161 477 Calmodulin-binding Proteins AT2G36910 24.923 1.61e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00416 K05681 - qsa:O6P43_006742 1065.06