Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00394 ATGTCGACTTTTGCCAAGCCCGAGAATGCTCTGAAACGAGCTGATGAATTAATTAATGTTGGACAAAAACAAGATGCACTTCAAACTCTTCATGACCTTATCACTTCTAAAAGATATAGAGCATGGCAGAAAACCCTTGAAAGGATTATGTTCAAATATGTTGAGCTTTGTGTTGAGATGCGTAGAGGTCGATATGCCAAGGATGGTCTCATCCAGTATCGAATCACATGTCAGCAAGTGAATGTTAGTTCACTGGAGGAGGTGATCAAACATTTTATGCATCTTTCAACAGAGAAAGCTGAACAAGCTCGTAGTCAGGCACAGGCCTTGGAAGAAGCTCTTGATATTGATGATTTAGAAGCTGATAAAAGGCCAGAGGACTTGATGCTGAGTTATGTGAGTGGAGAAAAAGGAAAGGATAGATCTGATCGAGAGCTTGTCACCCCATGGTTCAAATTTTTGTGGGAAACATACAGGACTGTGCTTGAGATTTTACGGAACAACTCAAAACTGGAAGCTTTATATGCTATGACGGCACATAGAGCCTTCCAGTTCTGTAAGCAGTACAAGCGGACAACAGAGTTTCGCAGGCTTTGCGAAATTATAAGGAACCATCTTGCTAATCTTAATAAATACCGAGACCAAAGAGATCGACCTGACCTTACTGCTCCGGAAAGTTTGCAACTGTATCTTGACACAAGATTTGAGCAGCTTAAAGTTGCGACAGAACTTGAAATGTGGCAGGAAGCTTTTCGATCAATTGAAGATATTCATGGACTGATGTGCTTGGTTAAGAAAACTCCCAAGACATCTGTGTTGGTTGTCTATTATGCTAAGCTAACAGAAATATTTTGGATATCTAGAAGCCATTTGTATCATGCATATGCTTGGCTCAGGCTGTTCCTGCTGCAAAAAAGCTTTAACAAGAATCTCACGCAGAAGGACTTGCAGTTAGTAGCATCATCTGTTGTTTTGGCTGCTCTTTCAATTCCTCCATATGATCGTACCCATGGTGCATCTCATTTGGACCTTGAGCACGAGAAAGAAAGAAACATAAAGATGGCTAATCTTATTGGGTTTAATCTTGAAACTAAACCTGAGAGTAGAGAAGTGCTGTCGAGGTCCTCCCTTCTATCTGAATTGGTGTCCAAAGGTGTAATGTCTTGTGCTAGTCAGGAAGTGAAAGATGTTTACCATCTTCTGGAGCATGATTTTACCCCACTGGATCTTACAGTAAAAATCCAGCCCTTGCTCGCCAAAATCTCTAAGTTCGGCGGTAAGATTTCTTCAGCTTCTTCTGTTCCAGAGGTGCAATTGTCTGAATACATTCCTTCCCTGGAGACTCTTGGAACTCTGAGGTTGCTTCAGCAGGTTTCAAAAATTTACCAGACAGTGAAGATTGAGGCTCTGTCTAGTATGATCCCTTTTTTTGATTTTGCCGTGGTTGAGAGGATTTCCGTGGATGCTGTCAAGCATAATTTTGTCCAATTGAAAGTTGACCATGCGAGAAATTGCATTGTCTTCTGCGAGATGAGTCTTGAGTCTGATGGCTTATTCAATCAACTGGCAATATTGGCCGAAGAGTTGAATGGTGCAAGATCGATGATCTATCCCCCGGTTAAGAAAGAAACAAAAAATAGTGATTTACTACCCAATCTGTTTGAAACTTTGGAGAAAGAACACAAGAAACTTTTAGCTCGCAAATCAGTGATTGAAAAGCGCAAGGAAGATCAAGAAAGGCAACTTCTGGAAATGGAACGCGAGGAGGAAACCAAGAGACTAAGAATTCGGAAGGTAACTGAAGAAGCAGAACAAAGAAGACTCGCAACTGAGTATGAGCAAAGGAAAAACCAAAGGATTCTTCGGGAAATACAGGAAAAGGAACAGGAGGAAGCCCAGGCTGTTCTGGAAGAGCTAAAAAAGAAGGGGAAGAAGCCAGTCATAGAGAAGGAAAAACTGACTAAAGAAACTTTGAGGAAGTTGGCTCTGAGTGAGCAGCTACGGGAAAAGCACGAAATGGAAAAGAAGTTGCAAAAACTAGCCAAGACCATGGACCATCTGGAGAGAGCAAAAAGGGAAGAGTCTGCTCCTCTGATTGAAGCTGCTTATCAACAGCGGTTAGTGAATGAGAGATTTGTTCATGAGCATGAGCAACAACAAGAGACTGAACTCAGTAAGCAGCGCCATGAGGGGGACCTGAAGGAGAAGGAGAGATTGGCCCGAATGAAGGACAATAAGGAAATATTTCAAGAAAGAGTTGTCAGTCAACGCCAAGCAGAATTTGATAGATTAAGGAAGGAAAGAGAAGAGCGAATCTCAAGAATTTTACAATCAAGGAAACAGGAAAGGGATAAAATGAGGAAGTTTAAATACTATTTGAAGTTGGAAGCAGAAAGGCAGAGAAAATTGCTCGAGGAGGAGGAAGATCGAAAATTAGAAGAGGCTGAGCGGCGCAAGAAGGAAGAGGCAGAACGTAAAGCCAAACTGGATGAGATTGCTGAGAAGCAGAGGCAGAGGGAGAGGGAAGCGGAAGAAAAGGAGAAGCTCAGAAGAGAGTCCCTACTTAAATCCACTGAATCACCTGTAAGGCCCTCTGGACTTCCAGCAGCAGCAGCTGCTGCTACCCGTCCATCAGAGTTGGGTTCTGCTGCTGCAGCACCGACAGCTGGGAAATACATTCCCAGGTTCCGGCGAACTGAAAGTTCTGGCCAGACTCCCCGGGAAACTGATCGTTGGGGCCACAGCAACAGTGGCAGGCAAGATGATAGGTTGCCCCCAGCCAGTGATAGGTGGCGCAGTGATGATCGTAGACCCTCTCTAGGTGGTTCAAGGTCATCATCAACATTGTCTTCCTCCAGAAACACCACACGTGGGTCTGATCGCTGA 2886 0.4352 MSTFAKPENALKRADELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVEMRRGRYAKDGLIQYRITCQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDIDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLTAPESLQLYLDTRFEQLKVATELEMWQEAFRSIEDIHGLMCLVKKTPKTSVLVVYYAKLTEIFWISRSHLYHAYAWLRLFLLQKSFNKNLTQKDLQLVASSVVLAALSIPPYDRTHGASHLDLEHEKERNIKMANLIGFNLETKPESREVLSRSSLLSELVSKGVMSCASQEVKDVYHLLEHDFTPLDLTVKIQPLLAKISKFGGKISSASSVPEVQLSEYIPSLETLGTLRLLQQVSKIYQTVKIEALSSMIPFFDFAVVERISVDAVKHNFVQLKVDHARNCIVFCEMSLESDGLFNQLAILAEELNGARSMIYPPVKKETKNSDLLPNLFETLEKEHKKLLARKSVIEKRKEDQERQLLEMEREEETKRLRIRKVTEEAEQRRLATEYEQRKNQRILREIQEKEQEEAQAVLEELKKKGKKPVIEKEKLTKETLRKLALSEQLREKHEMEKKLQKLAKTMDHLERAKREESAPLIEAAYQQRLVNERFVHEHEQQQETELSKQRHEGDLKEKERLARMKDNKEIFQERVVSQRQAEFDRLRKEREERISRILQSRKQERDKMRKFKYYLKLEAERQRKLLEEEEDRKLEEAERRKKEEAERKAKLDEIAEKQRQREREAEEKEKLRRESLLKSTESPVRPSGLPAAAAAATRPSELGSAAAAPTAGKYIPRFRRTESSGQTPRETDRWGHSNSGRQDDRLPPASDRWRSDDRRPSLGGSRSSSTLSSSRNTTRGSDR* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00394 961 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 943 IPR027512 GO:0005852
Pte15g00394 961 MobiDBLite consensus disorder prediction 901 939 - -
Pte15g00394 961 Coils Coil 554 602 - -
Pte15g00394 961 Coils Coil 794 852 - -
Pte15g00394 961 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 937 IPR027512 GO:0005852
Pte15g00394 961 Gene3D - 268 342 - -
Pte15g00394 961 Gene3D - 352 493 - -
Pte15g00394 961 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Pte15g00394 961 MobiDBLite consensus disorder prediction 804 961 - -
Pte15g00394 961 MobiDBLite consensus disorder prediction 940 961 - -
Pte15g00394 961 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 529 IPR000717 -
Pte15g00394 961 MobiDBLite consensus disorder prediction 715 741 - -
Pte15g00394 961 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Pte15g00394 961 MobiDBLite consensus disorder prediction 804 857 - -
Pte15g00394 961 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Pte15g00394 961 Pfam PCI domain 373 508 IPR000717 -
Pte15g00394 961 Coils Coil 610 642 - -
Pte15g00394 961 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Pte15g00394 961 Coils Coil 663 693 - -
Pte15g00394 961 Coils Coil 93 120 - -
Pte15g00394 961 Gene3D UVR domain 217 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00394 Pte-Chr15 2820595 2826301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00394 1 948 Eukaryotic Initiation Factors Gene Family AT4G11420 69.746 0.0 1300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00394 K03254 - gmx:100803796 1277.31