Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00390 ATGGCCGGAAAAGGAGAAGGCCCAGCCATTGGTATCGATCTCGGAACCACCTATTCCTGCGTCGGAGTTTGGCAGCACGACCGTGTTGAGATCATTGCCAATGACCAGGGAAATAGAACGACTCCATCGTACGTGGCTTTCACCGATACTGAACGTTTGATTGGTGACGCTGCTAAGAATCAGGTCGCCATGAACCCACTCAACACTGTCTTCGATGCAAAGAGGTTGATTGGAAGGAGGTTCAACGATGCCTCTGTTCAGGGTGACATCAAAATGTGGCCTTTCAAAGTTATACCAGGTCCTGCTGATAAACCCATGATTGTGGTTAGCTACAAGGGTGAGGATAAGCAGTTCGCCGCTGAAGAGATCTCATCTATGGTGCTTACCAAGATGCGTGAAATTGCAGAGGCTTATCTTGGTTCTACTATCAAGAACGCCGTGGTAACTGTACCTGCTTACTTCAACGACTCTCAGAGGCAGGCTACTAAGGATGCCGGAGTCATTGCTGGTCTCAACGTAATGAGGATTATCAATGAGCCAACAGCAGCGGCCATTGCATATGGTCTTGATAAGAAGGCCACCAGCGTTGGTGAGAAGAACGTATTGATTTTTGACCTTGGCGGCGGTACTTTTGATGTCTCCCTGCTCACTATTGAGGAAGGTATATTCGAAGTGAAAGCGACTGCTGGAGATACCCATCTTGGCGGTGAGGATTTTGACAACAGAATGGTCAACCACTTCGTGCAGGAATTCAAGAGAAAGAACAAGAAGGACATCAGCGGCAACCCCAGAGCTCTTAGGAGATTGAGAACCTCCTGCGAGAGGGCGAAGAGAACTCTGTCCTCTACAGCTCAGACCACAATTGAAATCGATTCCTTGTATGAGGGAATTGATTTCTACTCCACCATCACTCGTGCGAGGTTTGAGGAGTTGAACATGGATCTTTTTAGGAAGTGCATGGAACCAGTGGAGAAGTGTCTCAGAGATGCAAAGATGGACAAGAGCTCTGTTCATGATGTTGTACTCGTCGGTGGTTCCACCAGAATTCCCAAAGTTCAACAGTTGTTGCAGGACTTCTTCAATGGGAAGGAGCTCTGCAAGAGCATCAATCCAGATGAGGCCGTTGCTTATGGTGCAGCGGTCCAGGCTGCCATCTTGAGCGGTGAGGGTAATGAGAAGGTTCAAGATCTTCTATTGCTGGATGTCACTCCACTGTCTCTTGGACTTGAAACTGCAGGTGGCGTCATGACGGTGTTGATTCCCAGAAACACTACCATCCCAACAAAGAAAGAGCAGGTTTTCTCAACTTACTCTGACAACCAACCTGGGGTGTTGATCCAGGTATACGAAGGGGAGAGAGCACGAACCAGGGATAACAATTTGCTCGGAAAATTTGAGCTCTCTGGTATACCTCCTGCTCCCAGGGGAGTTCCTCAAATCACGGTGTGTTTTGACATTGATGCCAACGGTATCCTGAACGTATCTGCTGAGGACAAGACCACCGGCCAAAAGAATAAGATCACCATCACCAATGACAAGGGTAGGCTATCAAAGGAGGAGATCGAGAAAATGGTTCAAGAGGCCGAGAAGTACAAGGCTGAAGACGAAGAACACAAGAAGAAGGTCGACTCCAAGAATGCATTGGAAAATTATGCCTATAACATGAGGAACACAATAAAGGACGATAAGATTGGTGCCAAGCTCTCTGCGGATGATAAGAAGAAAATTGAGGACGCAATTGACCAGGCTATCCAATGGCTCGACAACAACCAGCTTGCGGAGGCCGATGAGTTTGAGGACAAGATGAAGGAATTGGAGAGTATCTGCAACCCCATTATTGCAAAGATGTACCAAGGTGGAGCGGAAGGAGCTGATATGGATGATGATGCACCCCCTGCCGGGGGAAGCAGTGCTGGTCCCAAGATTGAAGAAGTGGACTAA 1941 0.4802 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPLNTVFDAKRLIGRRFNDASVQGDIKMWPFKVIPGPADKPMIVVSYKGEDKQFAAEEISSMVLTKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDSKNALENYAYNMRNTIKDDKIGAKLSADDKKKIEDAIDQAIQWLDNNQLAEADEFEDKMKELESICNPIIAKMYQGGAEGADMDDDAPPAGGSSAGPKIEEVD* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00390 646 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 621 IPR029048 -
Pte15g00390 646 Gene3D - 71 126 - -
Pte15g00390 646 MobiDBLite consensus disorder prediction 620 646 - -
Pte15g00390 646 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Pte15g00390 646 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Pte15g00390 646 FunFam Heat shock 70 kDa protein 539 646 - -
Pte15g00390 646 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Pte15g00390 646 Coils Coil 518 541 - -
Pte15g00390 646 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Pte15g00390 646 FunFam heat shock 70 kDa protein-like 71 126 - -
Pte15g00390 646 FunFam Heat shock 70 kDa 391 545 - -
Pte15g00390 646 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Pte15g00390 646 Gene3D - 10 384 - -
Pte15g00390 646 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Pte15g00390 646 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Pte15g00390 646 PRINTS 70kDa heat shock protein signature 369 389 - -
Pte15g00390 646 PRINTS 70kDa heat shock protein signature 58 66 - -
Pte15g00390 646 PRINTS 70kDa heat shock protein signature 396 415 - -
Pte15g00390 646 PRINTS 70kDa heat shock protein signature 477 493 - -
Pte15g00390 646 PRINTS 70kDa heat shock protein signature 209 219 - -
Pte15g00390 646 PRINTS 70kDa heat shock protein signature 36 48 - -
Pte15g00390 646 PRINTS 70kDa heat shock protein signature 146 166 - -
Pte15g00390 646 PRINTS 70kDa heat shock protein signature 8 21 - -
Pte15g00390 646 PRINTS 70kDa heat shock protein signature 337 353 - -
Pte15g00390 646 Gene3D - 192 366 - -
Pte15g00390 646 Gene3D - 545 646 IPR029048 -
Pte15g00390 646 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Pte15g00390 646 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Pte15g00390 646 FunFam Heat shock 70 kDa 235 318 - -
Pte15g00390 646 PANTHER HEAT SHOCK PROTEIN 70KDA 9 583 IPR013126 GO:0005524|GO:0140662
Pte15g00390 646 FunFam Heat shock 70 kDa protein 197 260 - -
Pte15g00390 646 FunFam Heat shock protein 70 10 196 - -
Pte15g00390 646 Gene3D Actin; Chain A, domain 4 235 318 - -
Pte15g00390 646 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00390 Pte-Chr15 2788767 2797049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00390 1 647 Calmodulin-binding Proteins AT3G12580 91.730 0.0 1218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00390 K03283 - tcc:18586110 1204.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00390 15 2788767 2797049 Pte15g00390 15 2788767 2797049 RCT
Pte7g00645 7 23152677 23155565 Pte15g00390 15 2788767 2797049 RCT
Pte4g00455 4 32320039 32321828 Pte15g00390 15 2788767 2797049 RCT
Pte15g00390 15 2788767 2797049 Pte7g00645 7 23152677 23155565 RCT
Pte15g00390 15 2788767 2797049 Pte4g00455 4 32320039 32321828 RCT