Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00387 ATGTCATATTCAGAAGGTAGTACAAGCAAGGTTGGCAGAGCACTAGTTGTAGAAGATAGTATAACAATCCAAAGGATTCACCAGGGACTCTTGAATAAACTGGGAGTAATAGAAACTCAGTGTGTGGGAAACGGAAAGGAGGCAGTAGATATCCACTGCAAACTGGGACAACAGTACTTTGACTTGATTCTCATGGATATGGACATGCCTATCATGAATGGCATTGAGGCAACCAAGAGACTGCGCGCTATGGGCATACGTAGCATGATTGCAGGTGTGTCAACACGCTCCAACGAAGAAGAAATTCAAGAATTCAAGGAAGCTGGGTTGGATGATTACCTAGAGAAGCCTTTAACCATGGTCAAGCTTACGTCCGTTCTCAACAAGATGAACCATAATCGTTGA 405 0.4346 MSYSEGSTSKVGRALVVEDSITIQRIHQGLLNKLGVIETQCVGNGKEAVDIHCKLGQQYFDLILMDMDMPIMNGIEATKRLRAMGIRSMIAGVSTRSNEEEIQEFKEAGLDDYLEKPLTMVKLTSVLNKMNHNR* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00387 134 Gene3D - 8 134 - -
Pte15g00387 134 SMART REC_2 12 127 IPR001789 GO:0000160
Pte15g00387 134 SUPERFAMILY CheY-like 13 130 IPR011006 -
Pte15g00387 134 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 132 - -
Pte15g00387 134 CDD REC_hyHK_CKI1_RcsC-like 15 127 - -
Pte15g00387 134 ProSiteProfiles Response regulatory domain profile. 13 131 IPR001789 GO:0000160
Pte15g00387 134 Pfam Response regulator receiver domain 15 127 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00387 Pte-Chr15 2777199 2777760 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00387 15 130 Response Regulator Gene Family AT3G04280 42.735 2.07e-24 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte15g00387 Response_reg 5.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00387 - - rcu:8262779 152.525