Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00386 ATGGCTTTTGGTCCCAATGCCCCTGAGTTTCGTCGAGTCAATCGCAAGTGTCTGTCTTCTTTCAGTTCCAAGCTTCCAAAGCCAAGAGCCCTGGTAGTCGATGAAGTTTTTGACGTTCGAATGATGGAGTGGAGCCTTATAGTGCTGCAGGGAATTGTTACTGATGCTGCTGACAGCACTATTGAAGCACTAGCTCTCATTGCCTCTGGTATATACTATGATCTGATATTGATTGAAATGAACATGCCAATTCTTAATGGCATAGAGACAGTAAGACAAATTCGTGCTTGGGGCATACGCAGCAAGATTTTAGGTCTTGCTGATGCATACAATGAAGGTGAAAGAGAAGCATTTCTTGCAGCTGGAGCTGACATTTGCACTGAGAAAGAACTTCTTCCCGATGTGTTGGTAACTACCCTTGAAGAGCTCTACAACTAG 438 0.4406 MAFGPNAPEFRRVNRKCLSSFSSKLPKPRALVVDEVFDVRMMEWSLIVLQGIVTDAADSTIEALALIASGIYYDLILIEMNMPILNGIETVRQIRAWGIRSKILGLADAYNEGEREAFLAAGADICTEKELLPDVLVTTLEELYN* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00386 145 Pfam Response regulator receiver domain 31 140 IPR001789 GO:0000160
Pte15g00386 145 CDD REC_hyHK_CKI1_RcsC-like 31 140 - -
Pte15g00386 145 ProSiteProfiles Response regulatory domain profile. 29 144 IPR001789 GO:0000160
Pte15g00386 145 SMART REC_2 28 140 IPR001789 GO:0000160
Pte15g00386 145 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 143 - -
Pte15g00386 145 Gene3D - 16 145 - -
Pte15g00386 145 SUPERFAMILY CheY-like 26 144 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00386 Pte-Chr15 2773386 2773923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00386 31 145 Response Regulator Gene Family AT3G04280 30.769 2.53e-10 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte15g00386 Response_reg 7e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00386 - - dzi:111306146 102.449