Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00378 ATGCCAACTTTGCTTCGCTTCTTTCTCCCGTTTCTACATTTCCAATTCTGTTGCTCAGTTGGGGCTCTATCTAATAGTGTGCCATTTGCTGCGGAACCAGCAAACTTGTGGTTGAAGCCATCATCAGGACCATCTGCTGCCCCTGCAACTTCTCCCTCTAATAAAAGTCCTAGTATTTTTCGTGCACCCAGGCACCATCATCATTGGCATCATCAACACCATGATGTGAGACCACGTGTGGTTGCTCCATCTCCTACTAATGATCAAGGTTGTGATCAAATCTGTGCGGATCCACTCACTTCTACACCCTTCGGCTCACCCTGTGGCTGTGTCATTCCCATGAAAGTTAAACTTCTTCTTGATGTAGCTCCTTATTCGATTTTCCCTGTAATGAACGAGTTAGAAATAGAAGTTGCTTCAGGCACTTATTTGGAACAGAGTCAGGTGAAAATAATGGGTGCCAGTGCTGATACTGAAAACCAGGGAAGAACACTAGTTGATATCAACTTGGTTCCTTTGGGAGATAAATTTGACAATACCACCGCAATTTTGACATATGAAAGATTTTTGCATAAAAAGGTCCCTCTTAACAAGAGCCTTTTTGGTGGTGATTACTCTGTTTTGCTTATTATTTACCCAGGCCTACCTTCTTCACCTCCATTTGGAAGTCACATCGGGAGTGGTCCGAGTGAAAGTACTGAAAACCTGCCAATATCTGCAACTTTTGTGACGAAGAACCAGAAATTGAATATTAGAACCATAGTCATCATTGCTTTATCAGGCTTTGTGCTCTTGTTGTTGTTCATGGGAACATTTTCTATCATTTTCAAGTGGAGGAGGGCTAGAAGACAGTCAAATTCAGTTGGTCCTGCATTTGCATCATCTATGAACAAGAGATGTGGTTCAGGTTCTATCTTATCAGGCAGTATCGCCAGCTCAACATCTGGATCCCTTAAGTCGACCATGGCCACTTGTATGCTTTCTGTTAAAACATTTTCACTTTCTGAACTTGAGAAGGCGACTGATAAGTTCAGTTCAAAGAGAGTTCTTGGAGAAGGGGGTTTTGGGAGGGTGTATCGTGGTGTGATGGAAGATGGAAGTGAAGTTGCTGTGAAATTACTTACGAGGGATAATCAAAATGGAGACCGAGAATTCATTGCAGAAGTTGAGATGCTTAGCCGCTTGCATCATCGTAATCTTGTGAAACTCATTGGTATTTGCATTGAGGGGCACACACGATCCTTGGTTTATGAGCTTGTTCACAACGGCAGTGTTGAGTCCCATCTGCATGGTCCTGACAAGAAAAAAGGACCTCTTGACTGGGAAGCGCGGATGAAAATTGCTCTTGGGGCTGCCAGAGGACTGGCTTATCTTCATGAAGATTCTAACCCTCGTGTAATTCACCGGGACTTTAAAGCTAGCAATGTGTTATTAGAAGATGACTTCACCCCAAAGGTTTCAGATTTTGGACTGGCAAGGGAAGCAACTGAAGGGAGTCGCCATATCTCAACCCGTGTCATGGGAACTTTTGGATATGTTGCACCAGAATACGCAATGACAGGTCATTTACTCGTTAAGAGTGATGTATATAGCTATGGTGTCGTGTTGCTTGAACTTCTCACGGGAAGAAAACCTGTGGACATGTCTCAGCCTCCTGGACAGGAGAATCTTGTGACTTGGGCACGACCACTTTTGACCAGCAGAGAAGGCTTAGGGCAGCTAGTGGATCCAACATTTTCTGGAAGCTATGACTTTGATAACATGGCAAAGGTGGCGGCTATCGCTTCCATGTGTGTTCATCCAGAAGTGACCCACAGACCTTTCATGGGTGAAGTGGTGCAAGCTCTAAAGCTGATATACAATGATGCAGACGAGAATTGTGTAGATGGCTATAGTCAGAAGGAATCTTCTGCTCATGAGTCTGACCTTAGAGGAGACTTTGCTCCTTCTGAGGGCAGTTGGTGGAATGCTGGAGGGGTAACCCCTCGTCTAAATTGTGGTCAGGCCACTTCTTTTATCACAATGGATTACAGTTCCGGACCACTTGAGGAAGTGGAGAATAAAACATTTTCAGCTTCAAGTTTGTTTGGAGATGATATGTCTTTACCAGTCAGGCATGGGAACAGATCAGGTCCCCTCAGAAATGTCCGAAGCAAGCCATACTTATATAGATTTTCTGGAAGTCGGAGTGAACATGGGGGTTTGCTTGGAAAACGTCTTTGGAACGATGAATATTGGGTTTGA 2244 0.4412 MPTLLRFFLPFLHFQFCCSVGALSNSVPFAAEPANLWLKPSSGPSAAPATSPSNKSPSIFRAPRHHHHWHHQHHDVRPRVVAPSPTNDQGCDQICADPLTSTPFGSPCGCVIPMKVKLLLDVAPYSIFPVMNELEIEVASGTYLEQSQVKIMGASADTENQGRTLVDINLVPLGDKFDNTTAILTYERFLHKKVPLNKSLFGGDYSVLLIIYPGLPSSPPFGSHIGSGPSESTENLPISATFVTKNQKLNIRTIVIIALSGFVLLLLFMGTFSIIFKWRRARRQSNSVGPAFASSMNKRCGSGSILSGSIASSTSGSLKSTMATCMLSVKTFSLSELEKATDKFSSKRVLGEGGFGRVYRGVMEDGSEVAVKLLTRDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGHTRSLVYELVHNGSVESHLHGPDKKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLTSREGLGQLVDPTFSGSYDFDNMAKVAAIASMCVHPEVTHRPFMGEVVQALKLIYNDADENCVDGYSQKESSAHESDLRGDFAPSEGSWWNAGGVTPRLNCGQATSFITMDYSSGPLEEVENKTFSASSLFGDDMSLPVRHGNRSGPLRNVRSKPYLYRFSGSRSEHGGLLGKRLWNDEYWV* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00378 747 CDD STKc_IRAK 350 619 - -
Pte15g00378 747 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Pte15g00378 747 PANTHER OS01G0750732 PROTEIN 83 640 - -
Pte15g00378 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Pte15g00378 747 FunFam receptor-like serine/threonine-protein kinase ALE2 317 419 - -
Pte15g00378 747 MobiDBLite consensus disorder prediction 44 58 - -
Pte15g00378 747 SUPERFAMILY Protein kinase-like (PK-like) 328 617 IPR011009 -
Pte15g00378 747 Pfam Protein tyrosine and serine/threonine kinase 346 615 IPR001245 GO:0004672|GO:0006468
Pte15g00378 747 Gene3D Transferase(Phosphotransferase) domain 1 420 642 - -
Pte15g00378 747 Gene3D Phosphorylase Kinase; domain 1 306 419 - -
Pte15g00378 747 MobiDBLite consensus disorder prediction 41 61 - -
Pte15g00378 747 FunFam Receptor-like serine/threonine-protein kinase ALE2 420 637 - -
Pte15g00378 747 ProSiteProfiles Protein kinase domain profile. 344 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00378 Pte-Chr15 2717294 2725114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00378 87 733 Receptor kinase-like Gene Family AT5G56890 54.054 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pte15g00378 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00378 - - gmx:100792309 1115.14