Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00372 ATGGCTTCTCTCACCTGCTCCGCCTCTGAGCTACACTCCCTTCTCGCCACTAACGTTAACGCCAGTGCCGCCGCCGAATACATATGCAACCGCTTTGACGCTGTTTCAAACAAGTTTGTCGATACGTCCTATGCTGTGGACACTACCTTCCTCCTTTTCTCTGCCTACCTTGTTTTCGCAATGCAGTTAGGATTTGCTATGCTCTGTGCGGGGTCAGTCCGCGCAAAGAACACCATGAACATCATGCTCACCAATGTGCTTGATGCAGCAACTGGTGGAATTTTCTATTACCTTTTTGGTTTTGCTTTTGCATTTGGATCCCCATCAAATGGGTTTATAGGCAGACACTTTTTTGGCCTTGAGAAATTCCCATCCCTATCTTTTGATTATGGTTACTTTTTGTACCAATGGGCTTTTGCTATTGCAGCTGCTGGGATTACCAGTGGATCAATAGCGGAGAGAACCCAGTTTGTTGCATATCTGATATACTCATCATGTTTAACGGGATTGGTTTATCCAATTGTTTCACATTGGTTTTGGTCTGCTGATGGTTGGGCAAGTGCTGGTAGGGCTGACAATCTGCTTTTTGGATCTGGGGTTATAGATTTTGCTGGTTCTGGAGTGGTTCACTTGGTTGGGGCCATCGCTGGTTTCTGGGGTGCCTTTATTGAAGGACCCCGCGTTGGTAAATTTGACCATGATGGTAAAGCTGTAACCTTGCGGGGACATAGTGGCACTTTGGTTGTGTTGGGGACATTCTTGTTATGGTTTGGTTGGTACGGCTTCAATCCAGGTTCGTTTCTCACCATATTGAAGGGCTATGGAAGTAGTGGCTCATACTATGGGCAATGGAGTGCCATTGGTAGAACAGCGGTGACAACTACACTAGCTGGTTGCTCAGCAGCACTGACTACGCTCTTTGGCAGAAGATTGCTTTCAGGTCATTGGAATGTCATTGATGTTTGCAATGGTTTGCTTGGAGGTTTTGCAGCAGTGACCTCAGGGTGTTCTGTTGTTGATCCATGGGCTGCAATAATATGTGGATTTGTTGCTGCTTGGGTTCTCATCGGGTGTAACCAATTGGCAGAGAGATTCAAGTATGATGATCCGTTGGAAGCTGCACAACTTCATGGTGGATGTGGTTCATGGGGTATAATTTTCACTGCACTCTTTGCTAAGAAAGAGTATGTGAATGAGGTATATCCTGGTCAACCTAATAGGCCATATGGGTTATTCATGGGAGGTGGAGGCAAGCTCTTGGCAGCACATATTGTCCAGATTTTGGTAATATGCGGATGGGTGAGTGCCACCATGGGAACGTTGTTTTGGGCACTGCATAAATTGAAACTGTTGAGGATCACTCTTGACGAGGAGATGGCAGGAATGGATATAACTAAACATGGTGGATTGGCCTATGTGTACCATGATGAGCGTGATTCTGGGCAGAAGAACAACTTTGGATCGGCATAG 1470 0.4605 MASLTCSASELHSLLATNVNASAAAEYICNRFDAVSNKFVDTSYAVDTTFLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFYYLFGFAFAFGSPSNGFIGRHFFGLEKFPSLSFDYGYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSCLTGLVYPIVSHWFWSADGWASAGRADNLLFGSGVIDFAGSGVVHLVGAIAGFWGAFIEGPRVGKFDHDGKAVTLRGHSGTLVVLGTFLLWFGWYGFNPGSFLTILKGYGSSGSYYGQWSAIGRTAVTTTLAGCSAALTTLFGRRLLSGHWNVIDVCNGLLGGFAAVTSGCSVVDPWAAIICGFVAAWVLIGCNQLAERFKYDDPLEAAQLHGGCGSWGIIFTALFAKKEYVNEVYPGQPNRPYGLFMGGGGKLLAAHIVQILVICGWVSATMGTLFWALHKLKLLRITLDEEMAGMDITKHGGLAYVYHDERDSGQKNNFGSA* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00372 489 Gene3D Ammonium transporter AmtB like domains 25 486 IPR029020 -
Pte15g00372 489 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pte15g00372 489 FunFam Ammonium transporter 28 486 - -
Pte15g00372 489 SUPERFAMILY Ammonium transporter 44 453 - -
Pte15g00372 489 PANTHER AMMONIUM TRANSPORTER 19 468 - -
Pte15g00372 489 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pte15g00372 489 NCBIfam ammonium transporter 47 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00372 Pte-Chr15 2693428 2695111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00372 4 480 Inorganic Solute Cotransporters AT4G13510 75.105 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00372 K03320 - cave:132166278 844.343