Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00368 ATGAATAGCCTAAATAACAATGGAAAATCATCGACCACTGAAGGATTCAATACAATGGGTCACAAAAGTAAGAGTGAAGATGGCGAAACAAGAATGACCAACAGTGACAAAAACAAGTGTCACGGCAAAGAAAAAACCAATTTCAGGAATTCATACTTTGTTAAAGTTAATATGGATGGGTTTTCTATTGGAAGAAAAGTTAACATGAGTGCTCATATTTGCTATGAGACCCTTGCTAGAACTCTGAAAGAAATGTTCCATCTGCCTACTGAAGTCATCATCGCTGAAAGATATGATGATAATGACATGATTGTGGAAGCTCAAAGGCAGTCCAAACCGAATGAATCTTCTGAGTATGTTCTTACTTACGAAGACAAAGATGGAGACTGGATGCTTGCCGGAGATGTTCCGTGGGGGATGTTCATTAACTCAGTGAGGCGACTTCGAATAATGAAGAATGTTGAAGCTCAGGGACTTGTTCCCTACATACTGGAATCTGGTAGGACTGTTCTGGGTTTCAGTGAGGAAGTACCGGAAAGTGTCATCAATGTGTATGATGTAGCCCCGTTTGCTCACCCGTGCGGGAGTGCAAGTGGAATGTCAAAGCTCCAGAGTGCAAACTATCCTGTCACCTCATTAACTAACTAG 648 0.4136 MNSLNNNGKSSTTEGFNTMGHKSKSEDGETRMTNSDKNKCHGKEKTNFRNSYFVKVNMDGFSIGRKVNMSAHICYETLARTLKEMFHLPTEVIIAERYDDNDMIVEAQRQSKPNESSEYVLTYEDKDGDWMLAGDVPWGMFINSVRRLRIMKNVEAQGLVPYILESGRTVLGFSEEVPESVINVYDVAPFAHPCGSASGMSKLQSANYPVTSLTN* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00368 215 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 37 157 IPR003311 GO:0005634|GO:0006355
Pte15g00368 215 MobiDBLite consensus disorder prediction 1 43 - -
Pte15g00368 215 MobiDBLite consensus disorder prediction 20 43 - -
Pte15g00368 215 SUPERFAMILY CAD & PB1 domains 45 152 - -
Pte15g00368 215 Gene3D - 46 164 - -
Pte15g00368 215 ProSiteProfiles PB1 domain profile. 51 153 IPR000270 GO:0005515
Pte15g00368 215 MobiDBLite consensus disorder prediction 1 19 - -
Pte15g00368 215 Pfam AUX/IAA family 29 161 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00368 Pte-Chr15 2657144 2659987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00368 54 161 B3 DNA Binding Superfamily AT1G59750 27.778 3.80e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pte15g00368 AUX_IAA 5e-44 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00368 K14484 - pvy:116127407 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00368 15 2657144 2659987 Pte15g00368 15 2657144 2659987 RCT