Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00359 ATGGAGGCTCAGTCAGCATTTTCATCCCAAAGGTCAGGTGGCAAGGAGCTTAGGAACATGGTTGTCTCTGGGCCATGCTCTACATCAATGCCTGTCCTTCCAACACTGCTGGAGGAGTCATACCCCAAGTTGCCAGAGTGTCAACAAGTTTCAATAGAAAAAGAGCTTGTGACAAGACCTCCAACTCATTCTAGTAACTTGAATTCCAGTGAAGTTGCCGGACACATATTTTCATCTGCACCTGGACAGTCTACTGATCTACATTACTCATCTGTAGCACCCCATGAAAAGCACTCCAGAGATGCTCTATTTATTTCACAGCCATCAAGTGGACTAGTATCTTTGCCATTTTCACATTCCTCATATTCTGGGCCGCTAAAATCTGGAAGCATTCGTCATTATGCCAAAGATAACACTGCCTCCTGGCACACAGACTCATTTCCGAACTTCGTTGAGGTTCCCTCAAATACTTCTCTTGAGAATATTCAGGTAGAAGGAAGTAGCTGCAGTTGTCTGGTGGCCGAGGAATACTGTAAGAAAAATGATTGGCATGAATGGGCAGATCAACTGATCACTGATGACAATTCCTTGACTTCTAGCTGGAACGAGCTCCTTGGGGATGATGTTGGAGATCTGGAACCAAAGTCCCAAAACCAAAACCCGGTTCCTCCTCCTTTGAGAAAGATTTGCTCTGGTGCTACCTCATCCTCCGCAAATACAACCCCATCCAAGCCTCGTATGCGATGGACACCTGAACTCCATGAGGCCTTTGTGGAAGCTGTCAACCAACTCGGTGGCAGTGAAAGAGCTACTCCTAAGGGAGTCTTGAAGCAAATGAAAGTTGAATGCCTGACTATATACCACGTGAAAAGCCATTTGCAGAAATATAGGACAGCCAGGTGTAGACCAGAATCATCAGAAGGATCTTTAGAGAAAAAGACAACCTCAATTAAAGATATTCCGTCTCTTGACTTGAAAACTGGTATTGAAATCACAGAAGCTTTACGGTTGCAGATGGAGGTTCAGAAGCAGCTGCATGAACAGCTCGAGATTCAAAGAAATCTACAGTTGCGGATTGAAGAGCAAGGAAGGTACCTGCAAATGATGTTTGAGAAACAATGCAAGTCAGGCATTGACAAGTTGAAGCTACCAACTTCCACCTTGGAGAGTTCCTCAGGTGCAGCCTCAGATGCAATTCCAGATTCTTCTTCCAATAGTGAATTGGTATCCTCACAGGTGGACCATTGTAAGGCCTCAACCGATCAAGCTGGAGCGAACACTCCAATGGGAGAAAATTCAACCAACGCGCAAACTTCTGAGAAAGATGATGATCAGATTAATGCTCGACCATCGAAGTGCCAAAAGAAAATTGATGAATAA 1380 0.4464 MEAQSAFSSQRSGGKELRNMVVSGPCSTSMPVLPTLLEESYPKLPECQQVSIEKELVTRPPTHSSNLNSSEVAGHIFSSAPGQSTDLHYSSVAPHEKHSRDALFISQPSSGLVSLPFSHSSYSGPLKSGSIRHYAKDNTASWHTDSFPNFVEVPSNTSLENIQVEGSSCSCLVAEEYCKKNDWHEWADQLITDDNSLTSSWNELLGDDVGDLEPKSQNQNPVPPPLRKICSGATSSSANTTPSKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKQMKVECLTIYHVKSHLQKYRTARCRPESSEGSLEKKTTSIKDIPSLDLKTGIEITEALRLQMEVQKQLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGIDKLKLPTSTLESSSGAASDAIPDSSSNSELVSSQVDHCKASTDQAGANTPMGENSTNAQTSEKDDDQINARPSKCQKKIDE* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00359 459 MobiDBLite consensus disorder prediction 230 246 - -
Pte15g00359 459 Pfam Myb-like DNA-binding domain 246 297 IPR001005 -
Pte15g00359 459 Gene3D - 243 302 - -
Pte15g00359 459 MobiDBLite consensus disorder prediction 208 248 - -
Pte15g00359 459 MobiDBLite consensus disorder prediction 387 459 - -
Pte15g00359 459 Coils Coil 332 352 - -
Pte15g00359 459 SUPERFAMILY Homeodomain-like 241 298 IPR009057 -
Pte15g00359 459 MobiDBLite consensus disorder prediction 442 459 - -
Pte15g00359 459 FunFam Myb family transcription factor 243 301 - -
Pte15g00359 459 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 235 440 IPR044848 GO:0003700
Pte15g00359 459 Pfam MYB-CC type transfactor, LHEQLE motif 329 376 IPR025756 -
Pte15g00359 459 MobiDBLite consensus disorder prediction 387 441 - -
Pte15g00359 459 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 241 301 IPR017930 -
Pte15g00359 459 NCBIfam myb-like DNA-binding domain, SHAQKYF class 244 298 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00359 Pte-Chr15 2604493 2607921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00359 55 386 G2-like Transcription Factor Family AT4G28610 50.708 1.95e-92 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte15g00359 Myb_DNA-binding 1.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00359 - - cave:132165545 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00359 15 2604493 2607921 Pte15g00359 15 2604493 2607921 RCT