Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00358 ATGACCTCAAACAGCATGGCTGGCTTAGTCGCTGGTTCTGATACTAGAAATGAACTCCATTTTCCACATGGGGGTGCTGAGCACCGTCCTCCTTCAAGTATACCTGTATCAAAAGTATGTAGAGTTTGTGGAGATGAGATTGGATACAGAGAGAATCGAGAATTGTTTGTAGGGTGCCATGTTTGTGGCTTTCCTGTTCGTCGGTCATGTTATGATTATGAAACATTCAAGTATACCAGTGCTGTCCACAGTGCAATTCTCACTATAAGCGTCAAAAAGGTTGTCCTAGAGTGGTTGGAGATGAAGATGTGA 312 0.4327 MTSNSMAGLVAGSDTRNELHFPHGGAEHRPPSSIPVSKVCRVCGDEIGYRENRELFVGCHVCGFPVRRSCYDYETFKYTSAVHSAILTISVKKVVLEWLEMKM* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00358 103 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 84 IPR013083 -
Pte15g00358 103 SUPERFAMILY RING/U-box 27 76 - -
Pte15g00358 103 Pfam Zinc-binding RING-finger 37 75 IPR027934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00358 Pte-Chr15 2599131 2600701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00358 7 74 Cell Wall Biosynthesis AT5G17420 48.529 3.87e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00358 K10999 - pvy:116127267 112.079