Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00344 ATGGAGCGTGTGGTTGGTGGAAAATTCAAGCTTGGGAGGAAGATCGGGAGTGGGTCATTCGGGGAGCTCTATTTGGGGGTTAATATACAAACTGGAGAAGAGGTAGCAGTTAAGCTGGAATCATCGAAGACCAAACATCCACAGCTTCATTATGAGTCAAAATTGTACGTGCTGCTTCAAGGAGGAACTGGAATTCCTCACATCAAGTGGTTCGGGGTTGAAGGAGAGTACAATGTTATGGTGATTGACCTCCTAGGACCAAGTCTGGAAGATTTGTTTAATTACTGCAATCGGAAGTTCTCATTGAAAACTGTGTTGATGCTTGCTGATCAGTTTATCAATAGGGTGGAGTACATGCATTCTAAAGGTTTTCTTCACCGTGATATAAAGCCTGACAATTTTCTCATGGGCCTTGGTCGTAAAGCAAACCAGGTGTACATAATTGACTATGGCCTTGCAAAGAAGTACAGAGATCTTCAGACTCATAAGCACATACCTTATAGGGAAAACAAAAATCTGACAGGCACAGCTCGCTATGCGAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGAGATGATCTGGAATCGCTTGGTTATGTCCTCATGTACTTTTTAAGGGGAAGCCTTCCTTGGCAGGGACTAAAAGCTGGCACAAAGAAACAAAAGTATGACAAAATAAGTGAAAAGAAGATGTCTACTCCTATAGAGGTTCTCTGCAAATCACATCCATCAGAGTTTGTATCATACTTTCACTATTGTCGATCACTGAGGTTTGAGGACAAGCCAGATTATTCGTATTTGAAGAGGCTTTTCAGAGACTTATTTATTCGAGAAGGTTATCAGTTTGACTATGTTTTTGACTGGACTGTGTTGAAGTACCCTCAGATTGGAGGCAACTCCAGAGGAAGGCTTGTTACTGGCAAATCAGGTTTGGGTGCTGTATCATCTGTTCAAAAACCAGAAAAAATTTCAGTTGCAAAAGAGATCCGAGAGAAGTTCTCTGGTGCAGTTGAAGCATTTTCCAGGAGAAACAACACAACTTCTAGTCCACATGGTGATCGTTCCAAACATAGAACCTCTGATGATTTGCATGCCTCAAGAGATACGCGTCATGATACAGAGAAGGGACGAAGTACATCTCGGTATGGTAGCACTTCCAGAAAAGCTATGATTTCAACAGGCAGGCCAAGTTCCTCGGGTGATCATCATAGTGAAGGGCGTCGACTGGGATCAAGTGCTAGTCGATTGGGTTCAAGTGTTGGACGACAATCTACTGTACATAGGAGTCAAACTGGTTATGAAGCTAAGCGTACTTCATTTTCACGTACATCAACTTTGAAGGGCAATCGTGAAGATCCTCTGAGGAGCTTTGAACTTCTCTCAATCAGGAAATAG 1401 0.4247 MERVVGGKFKLGRKIGSGSFGELYLGVNIQTGEEVAVKLESSKTKHPQLHYESKLYVLLQGGTGIPHIKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQFINRVEYMHSKGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMSTPIEVLCKSHPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTVLKYPQIGGNSRGRLVTGKSGLGAVSSVQKPEKISVAKEIREKFSGAVEAFSRRNNTTSSPHGDRSKHRTSDDLHASRDTRHDTEKGRSTSRYGSTSRKAMISTGRPSSSGDHHSEGRRLGSSASRLGSSVGRQSTVHRSQTGYEAKRTSFSRTSTLKGNREDPLRSFELLSIRK* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00344 466 MobiDBLite consensus disorder prediction 381 401 - -
Pte15g00344 466 FunFam Casein kinase 1-like protein 1 330 - -
Pte15g00344 466 CDD STKc_CK1_delta_epsilon 8 282 - -
Pte15g00344 466 MobiDBLite consensus disorder prediction 450 466 - -
Pte15g00344 466 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pte15g00344 466 PANTHER CASEIN KINASE-RELATED 8 383 - -
Pte15g00344 466 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00344 466 MobiDBLite consensus disorder prediction 351 380 - -
Pte15g00344 466 Gene3D Transferase(Phosphotransferase) domain 1 1 336 - -
Pte15g00344 466 MobiDBLite consensus disorder prediction 339 466 - -
Pte15g00344 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pte15g00344 466 MobiDBLite consensus disorder prediction 413 449 - -
Pte15g00344 466 FunFam Putative Casein kinase I 1 85 - -
Pte15g00344 466 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00344 466 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Pte15g00344 466 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00344 Pte-Chr15 2521736 2526924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00344 8 213 MAP Kinase Kinase Kinase AT3G06030 25.926 3.82e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pte15g00344 Pkinase 8.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00344 K08960 - qsa:O6P43_010486 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00344 15 2521736 2526924 Pte15g00344 15 2521736 2526924 RCT