Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00343 ATGGTACCTGCAACGTTAAATGTGATTCCAACCCAAGAACATTACCACTGGGATTATTCTCCTGGTGGGTTCTCTTCTCCAATGTCTTCCATCCTATTTCAAAATAAGTCAGTAAATTACACGCACTTTGGACGTAACGATCTCTCAGATTGGGTTGAGAATATTACCAAGCAAATTGTTGATGACATCCCAGAATCTAACGTTGACAACAACCTCTTGCTGCACTCTGGTAACCCGGCCATGGTTTCTCATGATAACTATGCATCCACAGCCCCTTCAAACAACAACGCTAGTTCACGAAAACCTGCTTGGAAACATCAGCTTGAACCCAACAACAACGATATTATTCAGTTCAACAACGACAACCTTACCCAACCAAACACTTCAGATGTCAAGAGTAACCAGGGTCTAACCCTAATCACCTTACTAATGGAGTGTGCAGTTGCTATTTCAGTTGACAACCTAGGTGAGGCTCATAGGATGCTTCTTGAGCTGACACAAATGGCCTCACCTTATGGACCCTCTTGTGCCGAGCGTGTGGTTGCTTATTTTGCCAAGGCCATGGCTAGCAGAGTTATCAACTCATGGATTGGTATATGTTCCCCTCTGGTTAACTACAAAGGCCTTCACAGCTCTTTCCATGTCTTCAACAACATCTCCCCTTTCATCAAGTTTGCTCATTTCACTTCAAACCAGGCCATTCTTGAAGCAGTCCACCGCCGTGAGAGGATTCACATTGTTGATTTAGACATCATGCAAGGTCTGCAATGGCCAGCTTTATTTCACATCCTAGCAAACCGTATAGAGGGTGCACCCCATGTTAGAATGACAGGTATGGGGACTTCAATGGAGCTTTTGTTAGAGACAGGAAAGCAACTCTCCAATTTTGCAAGAAGGCTTGGACTCTCATTTGAGTTCCATCCAATCGCTAGAAAATTCGGAGAAATGGATGCTTCCATGCTGCAGGTTCGGCGTGGCGAAACGCTTGCTGTGCACTGGTTGCAGCATTCACTGTATGATGCAACTGGCCCTGACTGGAAAACACTGAGACAGCTAGAGCAATTGGAACCAAGAATCGTCACTTTGGTGGAGCAAGATGTCTCACATGGTGGCTCATTCTTAGACCGTTTTGTTGGGTCTCTGCATTATTACTCTACCCTCTTTGATTCTCTTGGAGCTCATCTGGCTCCTGATGACTCAAATAGACACCATGTTGAGCATTGTCTTCTATACAGGGAGATCCATAACATATTGGCCATAGGAGGTCCTGCAAGGAGCGGAGAAGACAAGTTTAGGCATTGGAAAAATGAGCTTGCAAGGCATCGTTTTCTACAGGTTCCAATGAGTGCAAATACAATGGCTCAGGCACAGTTGATACTGAATATGTTTCCTCCTGTCCATGGATATAGCCTTGTGCAAGGGGATGGGACATTGAGGCTTGGTTGGAAGGATACCGGTTTGTATACTGCTTCTGCATGGACTTGTAGTGATGTTACTAGGTAG 1503 0.4498 MVPATLNVIPTQEHYHWDYSPGGFSSPMSSILFQNKSVNYTHFGRNDLSDWVENITKQIVDDIPESNVDNNLLLHSGNPAMVSHDNYASTAPSNNNASSRKPAWKHQLEPNNNDIIQFNNDNLTQPNTSDVKSNQGLTLITLLMECAVAISVDNLGEAHRMLLELTQMASPYGPSCAERVVAYFAKAMASRVINSWIGICSPLVNYKGLHSSFHVFNNISPFIKFAHFTSNQAILEAVHRRERIHIVDLDIMQGLQWPALFHILANRIEGAPHVRMTGMGTSMELLLETGKQLSNFARRLGLSFEFHPIARKFGEMDASMLQVRRGETLAVHWLQHSLYDATGPDWKTLRQLEQLEPRIVTLVEQDVSHGGSFLDRFVGSLHYYSTLFDSLGAHLAPDDSNRHHVEHCLLYREIHNILAIGGPARSGEDKFRHWKNELARHRFLQVPMSANTMAQAQLILNMFPPVHGYSLVQGDGTLRLGWKDTGLYTASAWTCSDVTR* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00343 500 ProSiteProfiles GRAS family profile. 130 494 IPR005202 -
Pte15g00343 500 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 113 490 IPR005202 -
Pte15g00343 500 Pfam GRAS domain family 139 494 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00343 Pte-Chr15 2518512 2520014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00343 132 494 GRAS Transcription Factor Family AT3G54220 55.405 5.47e-140 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte15g00343 GRAS 5.5e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00343 - - pvy:116143161 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00343 15 2518512 2520014 Pte15g00343 15 2518512 2520014 RCT