Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00337 ATGCAACAAGGTCAGATGGATGCAACAGCAGCAAAATGCCTTGTCAACTGTATATCTCGATTTATTCATCTATTATCTTTCAGTTCCATAAAGCTTACACAAATACAGAAGAACTACGATCGTGTAGCCGAGTTGTTAAAGCATTTGAAAACTGTAATTGATGAAGATATTTATCGAATCACATCTGATGAAAATCTATCTAAAGAGTGCGAAGAGCTGGACATGGCAGTTAATGAGGCTAGGGAGTTTGCTGAACACTGGTCTCCAAAAAAGAGCAAGATTCACAGTTTGTTGCTGAGTGGAAAGCTGTTGAATAGAGTCCTAAGCTCTTCACTTGAGATTTGTCGCGTGATATATAAATTCCTAGAGTCATCTTCATCTTCTGGACTAAGTGATGTTCAGAACTGTATGCAGGAAATTAACTGTTTGAAATTGGAAGGTCTGACAGTTGATATCGAGGATTCCCTGAGAATTCAAAGAGAAAACAATGGGTTTTTCCTTGAACATATTATTAAAATCATTGAACCACTTGGTTTCACATCAAACAGGGAGCTTCTTAAAGAGAGTATTGCTTTAGAGAAGGAACGGGTGAAAGCTGAGCGAAATAAAATGAAAGGGGAATCATATGTTATTGACCAAATTATTGATCTTCTCTCTAATATACGAGACTACAGGATGAGATCAGAGTGTGCTGAGATTAGTAGCAGTATCTTGATCCCTGCATACTTCCGCTGCCCTTTGTCTTTAGAACTCATGTTGGATCCTGTAATTGTGGCTTCAGGACAAACCTACGAGAGGACTTCAATCCAGGAATGGCTAGATCATGGTCTAACCATCTGTCCAAAAACTCGTCAGAAGCTTACCCATGCAAATCTTATCCCAAATTGTGCTGTTAAAGCGATGGTAGCAAATTGGTGTGAGGAAAACTGTGTTACAGTTTCTTATAAATCTGAGCCATTGAATCAACTTCAAGAGCAAGAATTATCCCGCACACTCAGTATAAAGTCTTCTTTAAGTGGTAGCTATTCAACTTCAAGATCATATTTTCAAGCTGGAAATGGGTTAGAGAATCAAAAGAATGGTGTCTTTTCTAGGATAAGTGGTCTATCAAACGGATACCAAAATGGGACCAGAGAAAAGTTTGAGCAACCATCTCCTGCACCTTCCTCTACTCATAGCAGAAGCGCATCACTATCAAGTTCTTTTTCTAGCACGGATTATGGAATTCGAGCATCAAATGAAGTATTGAAAACATCTACTAGATGTCTGAATGAGTTTTCTGGAGAAATCACTTCTGAATCTTTTCGCTCCAACCCTCTAGCTAATGATGTAGATTCTCCACTGAAGTCAGGAAAACAAATTCAATTTCCTGAAAGAGAAGTTAATATGTTCGAGAATAGAAATAGTAGCCATTCAAAAGCACACTCTCTTCTCTCAAAGACCAGTGCTGATGGGTTGACCTCCATATCTCATATCATAAAATTGATTGAAGACCTTAATAGCCAATCAAATGATGTGCAAACTATGGCTGCAGAAGATTTGAGATTACTTGCTAAGCACAACATGGAAAACCGTATTACAATTGGCCAGTGTGGGGCTATCATGCCATTGCTCACACTTCTATATTCTAATGTGAAGCTAACACAAGAGCATGCTGTGACAGCCCTTCTAAATATATCCATTAGTGACGACAATAAGGTATTGATTGTAGAAGCAGGAGCCTTAGAAGCATTTATACATGTTTTGGGAACAGGAAGTGATGCAGCCAAAGAGAACTCGGCCGCTGCTATATATAGTCTGTCTCTTTTAGAAAAACATAAAGACAAAATTGGCCGTTCTGGGGCAATCAAAGCATTGGTAGACCTTTTAAGCTCTGGGACACTCAGAGGAAAGAAAGATGCTGCTACTGCTTTATTTAATTTGTCTATATTTCATGAAAACAAAGCTCGTATGGTTCAAGCTAGAGTTGTTAAATATCTTCTTCAGTTTCTGGATCCTATTACAGGAATGGCTGACAAAGCCGTTGCCCTTCTGGCTAATCTATCATCAATTGGAGACGGTCGCATAGCGATTGCCAGGGAAGGAGGCATTCCATTATTAGTTGCAATTGTTGAATCAGGTTCTTTGAGGGGAAAAGAAAATGCTGCCTCTGTACTGTTGCATCTTTGCCTTTCTAGTCCCAAGCACTGCACCCTGGTTTTACAAGAAGGGGTTGTCCCTCCGCTAGTTGCATTATCTCAATCAGGCACACCAAGAGCAAGAGAAAAGGCTCAACAGCTCCTCAGTCATTTTCGTAATCAGCGTAATCAGCGAGAAGGAGCCATAGGGAAGGGAAAATTTTCATAA 2346 0.396 MQQGQMDATAAKCLVNCISRFIHLLSFSSIKLTQIQKNYDRVAELLKHLKTVIDEDIYRITSDENLSKECEELDMAVNEAREFAEHWSPKKSKIHSLLLSGKLLNRVLSSSLEICRVIYKFLESSSSSGLSDVQNCMQEINCLKLEGLTVDIEDSLRIQRENNGFFLEHIIKIIEPLGFTSNRELLKESIALEKERVKAERNKMKGESYVIDQIIDLLSNIRDYRMRSECAEISSSILIPAYFRCPLSLELMLDPVIVASGQTYERTSIQEWLDHGLTICPKTRQKLTHANLIPNCAVKAMVANWCEENCVTVSYKSEPLNQLQEQELSRTLSIKSSLSGSYSTSRSYFQAGNGLENQKNGVFSRISGLSNGYQNGTREKFEQPSPAPSSTHSRSASLSSSFSSTDYGIRASNEVLKTSTRCLNEFSGEITSESFRSNPLANDVDSPLKSGKQIQFPEREVNMFENRNSSHSKAHSLLSKTSADGLTSISHIIKLIEDLNSQSNDVQTMAAEDLRLLAKHNMENRITIGQCGAIMPLLTLLYSNVKLTQEHAVTALLNISISDDNKVLIVEAGALEAFIHVLGTGSDAAKENSAAAIYSLSLLEKHKDKIGRSGAIKALVDLLSSGTLRGKKDAATALFNLSIFHENKARMVQARVVKYLLQFLDPITGMADKAVALLANLSSIGDGRIAIAREGGIPLLVAIVESGSLRGKENAASVLLHLCLSSPKHCTLVLQEGVVPPLVALSQSGTPRAREKAQQLLSHFRNQRNQREGAIGKGKFS* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00337 781 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 532 574 IPR000225 GO:0005515
Pte15g00337 781 Coils Coil 182 207 - -
Pte15g00337 781 SMART Ubox_2 242 305 IPR003613 GO:0004842|GO:0016567
Pte15g00337 781 MobiDBLite consensus disorder prediction 366 404 - -
Pte15g00337 781 FunFam RING-type E3 ubiquitin transferase 477 770 - -
Pte15g00337 781 FunFam RING-type E3 ubiquitin transferase 239 311 - -
Pte15g00337 781 CDD RING-Ubox_PUB 240 292 IPR045210 -
Pte15g00337 781 Pfam Armadillo/beta-catenin-like repeat 523 560 IPR000225 GO:0005515
Pte15g00337 781 Pfam Armadillo/beta-catenin-like repeat 687 723 IPR000225 GO:0005515
Pte15g00337 781 Pfam Armadillo/beta-catenin-like repeat 605 642 IPR000225 GO:0005515
Pte15g00337 781 Pfam Armadillo/beta-catenin-like repeat 562 601 IPR000225 GO:0005515
Pte15g00337 781 Gene3D - 567 773 IPR011989 -
Pte15g00337 781 PANTHER U BOX DOMAIN-CONTAINING 34 765 - -
Pte15g00337 781 SMART arm_5 521 561 IPR000225 GO:0005515
Pte15g00337 781 SMART arm_5 603 643 IPR000225 GO:0005515
Pte15g00337 781 SMART arm_5 562 602 IPR000225 GO:0005515
Pte15g00337 781 SMART arm_5 726 766 IPR000225 GO:0005515
Pte15g00337 781 SMART arm_5 644 683 IPR000225 GO:0005515
Pte15g00337 781 SMART arm_5 684 724 IPR000225 GO:0005515
Pte15g00337 781 Pfam U-box domain 239 309 IPR003613 GO:0004842|GO:0016567
Pte15g00337 781 Gene3D - 483 566 IPR011989 -
Pte15g00337 781 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 239 315 IPR013083 -
Pte15g00337 781 SUPERFAMILY ARM repeat 491 764 IPR016024 -
Pte15g00337 781 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 614 656 IPR000225 GO:0005515
Pte15g00337 781 SUPERFAMILY RING/U-box 239 310 - -
Pte15g00337 781 ProSiteProfiles U-box domain profile. 238 312 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00337 Pte-Chr15 2447665 2452907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00337 6 771 U-box Gene Family AT3G54790 49.872 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00337 - - qlo:115959783 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00337 15 2447665 2452907 Pte15g00337 15 2447665 2452907 RCT