Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00332 ATGAATTCCAATGTGGATTTCAGTTCTTCTCTCTTTCACTTCTCCAGTCCATCATCCTTCTCTGAAAGTAACCACTCCTACTCTGGGGACGAGCTGAGCTTGTTTTTGGATCTTCTTCCATTCAACTTCAGCGACCCACATGATACGATTCTCTACAATATTGTGGCCCAAGCAATGAAGATGGAACCATCGTCTGGCTCCAGCAACATTTCTTCCTCATTGGACAATGATGGTGCAGCAATAGTCCAACATAATCATGAAGACCAAGAAGTAGAAGTTACTTCCATTGATGTAAATAACCACAAATCACAAGTTCCACAACAATCACCGCAGCCGCCGACATCCAAGAGCAGCAAGAAAAAGACTAGAGCTTTCAGAGGAGTGAGGGCTAGGCCATGGGGAAAGTTTGCTGCGGAGATAAGGGACTCCACCAGGAACGGGGTTAGAGTATGGCTCGGAACATTTGATACGGCAGAAGCAGCAGCGTTGGCCTACGATCAAGCTGCATTTTCCATGAAGGGTTCGATGGCTGTGCTTAACTTCCCGGAGGAAGTAGTGAAGGATTCACTGGGAGAAATGAAAAGCAGAAACTGGGAAGATGGTTGCTCTCCCGTTTTGGCACTCAAGAAGAAGCATAGCTTAAGAAGAAAGTCGATGATCAGAAGGATGAGTAATGGGAAAACAGAATTACAGAGTGCACAGGAGGAAGAAGTGTTTGTTTTTGAGGATTTGGGAGCTGAATACTTAGAGCAGCTTTTGAGCATCACTGAAACTTCTCATCAGTGTCATAGTCCGCGGTGA 801 0.4544 MNSNVDFSSSLFHFSSPSSFSESNHSYSGDELSLFLDLLPFNFSDPHDTILYNIVAQAMKMEPSSGSSNISSSLDNDGAAIVQHNHEDQEVEVTSIDVNNHKSQVPQQSPQPPTSKSSKKKTRAFRGVRARPWGKFAAEIRDSTRNGVRVWLGTFDTAEAAALAYDQAAFSMKGSMAVLNFPEEVVKDSLGEMKSRNWEDGCSPVLALKKKHSLRRKSMIRRMSNGKTELQSAQEEEVFVFEDLGAEYLEQLLSITETSHQCHSPR* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00332 266 SMART rav1_2 124 188 IPR001471 GO:0003700|GO:0006355
Pte15g00332 266 FunFam Ethylene-responsive transcription factor 2 123 183 - -
Pte15g00332 266 Pfam AP2 domain 125 174 IPR001471 GO:0003700|GO:0006355
Pte15g00332 266 Gene3D AP2/ERF domain 124 184 IPR036955 GO:0003700|GO:0006355
Pte15g00332 266 Coils Coil 216 236 - -
Pte15g00332 266 PRINTS Ethylene responsive element binding protein signature 148 164 IPR001471 GO:0003700|GO:0006355
Pte15g00332 266 PRINTS Ethylene responsive element binding protein signature 125 136 IPR001471 GO:0003700|GO:0006355
Pte15g00332 266 MobiDBLite consensus disorder prediction 102 124 - -
Pte15g00332 266 MobiDBLite consensus disorder prediction 102 118 - -
Pte15g00332 266 CDD AP2 125 183 IPR001471 GO:0003700|GO:0006355
Pte15g00332 266 SUPERFAMILY DNA-binding domain 125 183 IPR016177 GO:0003677
Pte15g00332 266 ProSiteProfiles AP2/ERF domain profile. 124 182 IPR001471 GO:0003700|GO:0006355
Pte15g00332 266 PANTHER DNA-BINDING DOMAIN 84 257 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00332 Pte-Chr15 2399203 2400022 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00332 75 259 AP2-EREBP Transcription Factor Family AT3G23240 51.351 1.01e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte15g00332 AP2 5.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00332 K14516 - qsa:O6P43_006909 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00332 15 2399203 2400022 Pte15g00332 15 2399203 2400022 RCT