Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00330 ATGAATTTCAGCTCTTGCAGATCATTCAAAAGCGCAAGTCCACAGTTGTCTACAGAAAAATGCCTTCAAGACTCTTTCAGCTTGTGGGACGAGTTCTTGCTATTCGACAACGTCCTTCCCTTCAATTTCTGCAGTGATCATTTGCCAGATATGGTACTTGACGATTCAGTGGATAAGGGAACAAAGGATCCCTCGTCAGAATCCAATTCTGCAACATATACTGCAGCGCTAGTCCAACAAGTGAAGGAAGACCAAGAAGTCATTTCTGATAGCTCATATGTAAAAGTCGAAGATGATGATTGTGAACCAAGATCAGCAGCAATGGTTGCAAGGCCCCTATCCCGTGCACTGCCTCAGACTGGCTCTACTGAAAAACGGAAGAGGGCCTACAGAGGAGTAAGGAGGCGACCTTGGGGAAAGTTTGCTTCAGAGATAAGAGACTCTACTAGGCAAGGGGTTAGAGTATGGCTTGGAACATTTGATACAGCTGAAGCAGCAGCTTTGGCATATGATCAGGCTGCATTTTCGATGCGTTGTTCAATGGTTGTGCTTAACTTTCCAGAGGAAATAGTGAGGGACTCACTCAGAGACATGAAATGCAAGTATTGGGACGATGGTTCCTCACCTGTATTGGCACTCAAGAGGAAGCACTGCTTGAGAACAAGGTCACAGCTGCCGCCAGGGAAAAGGACACAGAGAAAAACTTCAGCAAATCAAGCTACGCAGAATTTGGTCGTGTTGGAAGACCTGGGAACTGAATATCTAGATCAACTGCTAAGCTTAACCTCATTCTAG 795 0.4541 MNFSSCRSFKSASPQLSTEKCLQDSFSLWDEFLLFDNVLPFNFCSDHLPDMVLDDSVDKGTKDPSSESNSATYTAALVQQVKEDQEVISDSSYVKVEDDDCEPRSAAMVARPLSRALPQTGSTEKRKRAYRGVRRRPWGKFASEIRDSTRQGVRVWLGTFDTAEAAALAYDQAAFSMRCSMVVLNFPEEIVRDSLRDMKCKYWDDGSSPVLALKRKHCLRTRSQLPPGKRTQRKTSANQATQNLVVLEDLGTEYLDQLLSLTSF* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00330 264 Gene3D AP2/ERF domain 129 189 IPR036955 GO:0003700|GO:0006355
Pte15g00330 264 SMART rav1_2 129 193 IPR001471 GO:0003700|GO:0006355
Pte15g00330 264 CDD AP2 130 188 IPR001471 GO:0003700|GO:0006355
Pte15g00330 264 PRINTS Ethylene responsive element binding protein signature 153 169 IPR001471 GO:0003700|GO:0006355
Pte15g00330 264 PRINTS Ethylene responsive element binding protein signature 130 141 IPR001471 GO:0003700|GO:0006355
Pte15g00330 264 PANTHER DNA-BINDING DOMAIN 86 259 IPR044808 GO:0003700|GO:0009873
Pte15g00330 264 SUPERFAMILY DNA-binding domain 129 188 IPR016177 GO:0003677
Pte15g00330 264 ProSiteProfiles AP2/ERF domain profile. 129 187 IPR001471 GO:0003700|GO:0006355
Pte15g00330 264 FunFam Ethylene-responsive transcription factor 2 128 188 - -
Pte15g00330 264 Pfam AP2 domain 130 178 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00330 Pte-Chr15 2372364 2373451 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00330 114 259 AP2-EREBP Transcription Factor Family AT3G23240 56.376 5.64e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte15g00330 AP2 2.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00330 K14516 - qsa:O6P43_006909 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00330 15 2372364 2373451 Pte15g00330 15 2372364 2373451 RCT