Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00329 ATGGAGGGAAAGAATAGATCAGTAAAGGGAAGAGGGTCAGGAGAGGTTGAGGTTAGATATAGAGGGATACGTAAGAGGCCATGGGGTAAGTTCGCAGCAGAGATTCGTGATCCCACAAGGAATGGAACTCGCATATGGCTGGGAACGTTTGAGACTGCAGAGGAAGCTGCAAGGGCATATGACCAGGCTGCCTTTGCTTTCCGGGGCCATACAGCCATTCTCAACTTCCCCAATGAGTACAGAGTACCAGACGACCGTCCAATTCGTCACGCCTCTTTCTCAGCATCTGCAGCAACAATGTCATCTGTTTCTTCTTCTGCTCATCAGCCTTATTCGTCTTCATCATCCTCTTCTGCTTCTCTCTCTGGGCATAACTTTGCGCCTACAACTAGTTCTTCGTCAAGCGAACAACAACAAGGTGATGTTCTCGAATTGGAGTATCTGGATGAGGGGTTACTGGATAAGCTTCTTCAGGAGGAAGATGACGGGAAATGGTCAAGACATGGTGATCGTAGAAATGATTGGTAG 528 0.4792 MEGKNRSVKGRGSGEVEVRYRGIRKRPWGKFAAEIRDPTRNGTRIWLGTFETAEEAARAYDQAAFAFRGHTAILNFPNEYRVPDDRPIRHASFSASAATMSSVSSSAHQPYSSSSSSSASLSGHNFAPTTSSSSSEQQQGDVLELEYLDEGLLDKLLQEEDDGKWSRHGDRRNDW* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00329 175 MobiDBLite consensus disorder prediction 94 144 - -
Pte15g00329 175 FunFam Ethylene-responsive transcription factor 2 18 78 - -
Pte15g00329 175 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Pte15g00329 175 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Pte15g00329 175 Pfam AP2 domain 19 70 IPR001471 GO:0003700|GO:0006355
Pte15g00329 175 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Pte15g00329 175 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
Pte15g00329 175 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Pte15g00329 175 MobiDBLite consensus disorder prediction 94 141 - -
Pte15g00329 175 SUPERFAMILY DNA-binding domain 19 78 IPR016177 GO:0003677
Pte15g00329 175 PANTHER DNA-BINDING DOMAIN 16 158 IPR044808 GO:0003700|GO:0009873
Pte15g00329 175 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00329 Pte-Chr15 2368252 2369637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00329 17 161 AP2-EREBP Transcription Factor Family AT3G23230 53.793 1.26e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte15g00329 AP2 9.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00329 - - tcc:18613156 127.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00329 15 2368252 2369637 Pte15g00329 15 2368252 2369637 RCT