Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00321 ATGGCATCTGGAGCTGGTAACAATGGCACAAGCACTGGCAATAGCTCCGGATCCCCTTGCGGGGCATGCAAGTTCTTGAGGCGAAAGTGCGCCGCAGATTGTGTCTTTGCGCCTTATTTTTGCTCAGAACTAGGCCCTGCTAGATTTGCCGCCATCCACAAGGTGTTTGGTGCTAGCAATGTTTCCAAGTTGTTGCTGCATATACCAGCTCATGATCGCTGTGAGGCTGTTGTCACGATAGCATATGAAGCTCAAGCACGAATCAGAGACCCCGTTTATGGCTGTGTTTCTCACATCTTTGCCTTGCAACAGCAGGTAGCCTATTTGCAAGCACAACTGATGCAAGTGAAGGCTCAATTGGCGCAGAACCTAATTGGCCCCAAGAACTTAGAGAACCACTGGTCTGACAATATTGCTGGCCAAACCATTGACCCTGGGTATCCCAATTACAATCACACGAACCCTATATCTCCTCAAAGCTCACTTGGATCCATTGATCAACCTTGTAGTGATGGATTCATGTTGAATATGCCAGAAATACAAAGCAGGGAAGATTTTTCATTGCATCACTGTTCAAAGAAAAGACCTTATAATACAGATCACTTGGGTGAGCTACAGGAACTGGCTCTCAGGATGATGAGAAACTAG 648 0.466 MASGAGNNGTSTGNSSGSPCGACKFLRRKCAADCVFAPYFCSELGPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVAYLQAQLMQVKAQLAQNLIGPKNLENHWSDNIAGQTIDPGYPNYNHTNPISPQSSLGSIDQPCSDGFMLNMPEIQSREDFSLHHCSKKRPYNTDHLGELQELALRMMRN* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00321 215 ProSiteProfiles LOB domain profile. 18 120 IPR004883 -
Pte15g00321 215 Pfam Lateral organ boundaries (LOB) domain 19 117 IPR004883 -
Pte15g00321 215 PANTHER LOB DOMAIN CONTAINING PROTEIN 15 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00321 Pte-Chr15 2318058 2319228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00321 8 216 AS2 family AT2G42430 54.321 1.17e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte15g00321 LOB 1.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00321 K13944 - tcc:18613181 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00321 15 2318058 2319228 Pte15g00321 15 2318058 2319228 RCT