Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00304 ATGGTTGTACTCTGTAAGTTTCAGAAATTCTTATGTGCAACAGGGGTTAGAAGCTCAGAATTCTCAAACTCGCTTGCAATATTGAACAGATGTTATCACGTCAATTCAGAAACCAGCTGCATTAAAGTGCTTCGGAACTTATCAGGTCCACCAAGTTCCTTGCCTAAGAGTGTTGCTGTTTTCTGGGACCTGAACAACAAACCACCGAAATCTTGCCCCTTATATCAAGCTGCTGTGAAGCTAAAAACAGCTGTTTCTTCCTTTGGGATCACCTGCCACATGGTAGCTTACGCAAACAGGCATGCTCTCACTTGCGTGCCACATTATGTTAAGGATCAAAGGAAAGAGAAGAAGCTATGGAATCAGTTGGAGAGTAGAGGTATGAATAAGCCAAGTGAACCTTATCTTTGCCGAGTTTGTGGGAGAAGATTTTATACGAATGAGAAAATGGTTAATCATTTTAAACAAATTCATGAGCGTGAGCACAAGAAGAGGTTGAATCAAATTGAGTCAGCAAGGGGGAAAATGAGGGTAAAGTTGGTGGCTAAATATTCGATGAAAATGGAGAAGTATAAAAATGCAGTAAGGGAAGTTTTAACTCCAAAAATAGGGTTTTGTCTGGCAAGTGAGTTAAAACGTGCTGGTTTCCTTGTTCAGCCTGTGCCAGATAGGCCACAAGCAGCAGAAATTGAAGTGAATATGATTGCTCTGATGGACAAGAAACATATTGGTTGCATGGTTATTGTGTCTAATGATTCTGATTTTGTTGACGTTTTAAAGGAGGCAAAATTAAGAGGCCTCAAGACTGTTGTTGTTGGTGATATCAGTGATGGAGCGTTAAAGAGGGTCGCTGATGTTGGATTTACTTGGACTGAAATTTTGATGGGGAAGGCAAAAAAGGAGGCAACTTCAGTCCTGGAGAGATGGAAGGATCGTGATATTTTGAAAAGGCTAGAGTGGCGATATGATCCAGAGGAAGAGAGAAAGAAATGCCATTTGGAAGATGCTGATTCTGAAGTGACAGAGGATGAGGATTTTGTTGAGGGAACGGATGGTGACAACAAACAGTTTGATGACTCACGTGCTTGGTGGGAATTGGATTAG 1104 0.4121 MVVLCKFQKFLCATGVRSSEFSNSLAILNRCYHVNSETSCIKVLRNLSGPPSSLPKSVAVFWDLNNKPPKSCPLYQAAVKLKTAVSSFGITCHMVAYANRHALTCVPHYVKDQRKEKKLWNQLESRGMNKPSEPYLCRVCGRRFYTNEKMVNHFKQIHEREHKKRLNQIESARGKMRVKLVAKYSMKMEKYKNAVREVLTPKIGFCLASELKRAGFLVQPVPDRPQAAEIEVNMIALMDKKHIGCMVIVSNDSDFVDVLKEAKLRGLKTVVVGDISDGALKRVADVGFTWTEILMGKAKKEATSVLERWKDRDILKRLEWRYDPEEERKKCHLEDADSEVTEDEDFVEGTDGDNKQFDDSRAWWELD* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00304 367 MobiDBLite consensus disorder prediction 350 367 - -
Pte15g00304 367 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 40 366 - -
Pte15g00304 367 Pfam NYN domain 212 290 IPR021139 GO:0004540
Pte15g00304 367 ProSiteProfiles Zinc finger C2H2 type domain profile. 135 163 IPR013087 -
Pte15g00304 367 ProSitePatterns Zinc finger C2H2 type domain signature. 137 158 IPR013087 -
Pte15g00304 367 SUPERFAMILY beta-beta-alpha zinc fingers 126 170 IPR036236 -
Pte15g00304 367 MobiDBLite consensus disorder prediction 327 367 - -
Pte15g00304 367 Gene3D - 52 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00304 Pte-Chr15 2196717 2199598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00304 30 367 C2H2 Transcription Factor Family AT4G12240 52.738 4.80e-126 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte15g00304 NYN 1.1e-06 CL0280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00304 - - qlo:115972370 452.21