Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00297 ATGGCGAACAATCACCCTTCAGACACTGCAACTGATGACTTTCTTGAGCAAATTCTTGGTCTTCCGAACTTCGCTCCTGCCGATTCCACCTTGAGTGGTACTGATAACGGCTTGCCCAGTCCACACGCTCCTCCTACTCATATGATGCTTCATCTTCACTCTGGCGATGCTTCTGGGCACCTTTCCCCTGTGGGTGGTGTTGGAGCTGCTGCCTTTCATGGCCCGGCTATGTACCAGTTAGGGTTAAGTTTGGACCAAGGGAAATCTGCGTTCTTGAAGAACGAGGAACCTTCAGGTAGCGGCAAACCGTTTCGTGATGATCTTGCTGATGGCAGGGCAAAGAATGTATTCCATGGTCAACAAATTCCTACAACTGTCGCTGCTGCACCACATCCTCCAGCTATGCGTCAGAGGGTGCGGGCTCGGAGAGGACAGGCCACAGATCCACACAGCATTGCTGAAAGGTTGCGCAGAGAAAGAATAGCGGAGAGAATTAGGGCATTGCAAGAACTGGTTCCTAGTGTCAACAAGACAGATAGAGCTGCCATGCTTGACGAAATTGTGGATTACGTGAAGTTCCTAAGGCTCCAGGTCAAGGTCTTGAGCATGAGTAGGATTGGCGGAGCAGGAGCTGTGGCACCACTAGTAACAGATATTCCACTATCGTCGATTAAGGAGGAAGGAGTTGAAGGTGGAAGGGATGAACCAGCTTGGGAGAAATGGTCAAACGATGGCACAGAAAAACAGGTTGCTAAACTCATGGAAGAAAATGTCGGGGCTGCCATGCAATTCCTTCAGTCGAAGGCGCTTTGCATCATGCCGATCTCATTGGCGTCAGCAATATACCAGTCACAGCCCCTGGAAACCTCTAGTATCGTCAAGCCCGAATCCAATCCTCCTTAG 903 0.5028 MANNHPSDTATDDFLEQILGLPNFAPADSTLSGTDNGLPSPHAPPTHMMLHLHSGDASGHLSPVGGVGAAAFHGPAMYQLGLSLDQGKSAFLKNEEPSGSGKPFRDDLADGRAKNVFHGQQIPTTVAAAPHPPAMRQRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRIGGAGAVAPLVTDIPLSSIKEEGVEGGRDEPAWEKWSNDGTEKQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPLETSSIVKPESNPP* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00297 300 MobiDBLite consensus disorder prediction 25 51 - -
Pte15g00297 300 Gene3D - 140 202 IPR036638 GO:0046983
Pte15g00297 300 Pfam Helix-loop-helix DNA-binding domain 150 194 IPR011598 GO:0046983
Pte15g00297 300 MobiDBLite consensus disorder prediction 128 149 - -
Pte15g00297 300 FunFam Basic helix-loop-helix transcription factor 140 202 - -
Pte15g00297 300 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 204 IPR036638 GO:0046983
Pte15g00297 300 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 145 194 IPR011598 GO:0046983
Pte15g00297 300 SMART finulus 151 200 IPR011598 GO:0046983
Pte15g00297 300 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 58 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00297 Pte-Chr15 2174875 2178717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00297 72 300 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 75.424 5.52e-107 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte15g00297 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00297 - - qsa:O6P43_006960 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00297 15 2174875 2178717 Pte15g00297 15 2174875 2178717 RCT