Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00276 ATGCCTAGAACAATTGGAAGAGATCTCAATCTGTGTTTCATAAAGATCAAGAGCCCATTAGCAATCTGTAATTCTTCCTCTTCTTCACCAAATACTGATCATGACCATCAAGATCGTCCTTGTGCAACCACAAACAATAGGACCAGCAATGCTTCTGCCAACTTTCGCTCATCAACCTTCATCAAAAACTTCAACTCCCTCTACGACAATACCGTCGAGTGCACCTATAAATCTCTTACTCAAACCTCTTCCTCTCTTTCCAACACTTCTATAGCCACCGCTTCTGCCTCTACCTCCTCTCGTGAACATGAACCTGAACCTGAACCCGAACCCGCTGACTTCGCCACTGCTTTTGCTTCCAAACGCTTCTTCTTCTCTTCTCCTGGTCGCTCCAACTCCATCATTGAATCCACAAGCAGCACCATAGATTGCTGTATTTACTCCTCATCGACTTCGAGGTCGTCGTCCATGGCAGTCACTCTTCCAGATGATAGAAACAGGAAGCTCATCATTGATAGCAGTGTGGCTGTGCACACGCATTCACCGGACCCTTACGCAGACTTCCGCAGGTCCATGCAGGAGATGGTGGAGGCTCGTACAACCACGGACGCATTAATGGATGTGAAATCCAACTGGGAATTTTTACACGAACTTCTCCAGTGTTATCTTGCTCTCAACCCCCGTAACACCCACAAGTTCATTATCGGAGCTTTTGCCGATCTTCTGGTAAGCCTTATGCACCTGCAGGGCAAGACGCTGGATGACGATATGGCCGTCGTCAATGGCGATGGTAGCGAGTGA 801 0.4769 MPRTIGRDLNLCFIKIKSPLAICNSSSSSPNTDHDHQDRPCATTNNRTSNASANFRSSTFIKNFNSLYDNTVECTYKSLTQTSSSLSNTSIATASASTSSREHEPEPEPEPADFATAFASKRFFFSSPGRSNSIIESTSSTIDCCIYSSSTSRSSSMAVTLPDDRNRKLIIDSSVAVHTHSPDPYADFRRSMQEMVEARTTTDALMDVKSNWEFLHELLQCYLALNPRNTHKFIIGAFADLLVSLMHLQGKTLDDDMAVVNGDGSE* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00276 266 Pfam Transcriptional repressor, ovate 181 245 IPR006458 -
Pte15g00276 266 ProSiteProfiles OVATE domain profile. 177 244 IPR006458 -
Pte15g00276 266 MobiDBLite consensus disorder prediction 90 111 - -
Pte15g00276 266 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 52 245 IPR038933 GO:0045892
Pte15g00276 266 MobiDBLite consensus disorder prediction 25 49 - -
Pte15g00276 266 NCBIfam uncharacterized plant-specific domain TIGR01568 175 246 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00276 Pte-Chr15 2009424 2010224 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte15g00276 Ovate 2.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00276 - - qsu:112014051 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00276 15 2009424 2010224 Pte15g00276 15 2009424 2010224 RCT