Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00254 ATGGAAGCTGAAGGACTCCCTGCTAAAAGACACAAATGCCCTGCATGCTACAAACAGTATAAGAAGAAGGAGCATTTTCTTGAGCACATAAAAGCCTCTTGCCATTCAGTTCATCAACCTAAATGTGGGGTGTGTCAAAAGCATTTGAAATCTTTTGATTCACTGAGGGAACACCTCATTGGTACGTTGGCAAAGAAATATTGTTCAAGTATTTTCTCTGCGCTGGGTTGCGATCTTTGCTTGACATTATTTAGCAGCACGGGAACACTTAGAGAGCACCGAGAATCATGTCGTCTATTTGCCCCTGTTCTGCTAGGAACAGAAGTATTGGGCCATGCAGGATCTGTCTTTTCTATTTTGCATTCATCTGCACCAGGTCAAGCTAGAAGAGGTTCAGAAGCAATTGCTATTGACTGTGAGATGGTTGGGGGTGGGAGTGATGGATCACTTGACCTCTGTGCTAGAGTATGCTTAGTTGATGAGGATGAAAATCTGATTTTCCACACTTATGTACAGCCTCAACACCAGATTGTAAATTATAGGTATGCAATAACTGGTTTGACTGAGGAGCATCTGAAAAATGCAATGCCGTTGAAGGAAGTTCAAGAAAAGGTATTGCAAATTCTTCAAAATGGAGAGTCTCCTGGAAAATCGACGTTAGGTGGTGGAAAGCGCAGACTTCTTGTAGGGCATAGCTTGGAATATGACTTGGAGTGCTTGAATATAAGTTATCCTGATAACATGCTGAGGGATACAGCAAAATACTGTCCGTTGATGAAAACAAATTTGGCCAGCCATTCGCTCAAGTACCTCACCCAAACATATCTAGGCTATGATATTCAGTTGGGCATCCATGATCCTTATGAAGATTGTGTGTCTGTCATGAGACTGTACAAGAGGATGAGAGGTCAGCATCACCGACATGATGGTATTGAAGCACAAAATGCACCTAACGATTCACACGATACTTTTAGCAATTTCGACAGTTGGAGTTCTGAGCAACTTGAGAATTTTACACTCGATCAACTGTATAAAGCATCTCTACCGGACTATAGGTGTTGGTGTTTGGATTGGAAGGAATTTGGGAGTTAA 1092 0.4194 MEAEGLPAKRHKCPACYKQYKKKEHFLEHIKASCHSVHQPKCGVCQKHLKSFDSLREHLIGTLAKKYCSSIFSALGCDLCLTLFSSTGTLREHRESCRLFAPVLLGTEVLGHAGSVFSILHSSAPGQARRGSEAIAIDCEMVGGGSDGSLDLCARVCLVDEDENLIFHTYVQPQHQIVNYRYAITGLTEEHLKNAMPLKEVQEKVLQILQNGESPGKSTLGGGKRRLLVGHSLEYDLECLNISYPDNMLRDTAKYCPLMKTNLASHSLKYLTQTYLGYDIQLGIHDPYEDCVSVMRLYKRMRGQHHRHDGIEAQNAPNDSHDTFSNFDSWSSEQLENFTLDQLYKASLPDYRCWCLDWKEFGS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00254 363 SMART exoiiiendus 133 307 IPR013520 -
Pte15g00254 363 Gene3D - 130 321 IPR036397 GO:0003676
Pte15g00254 363 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 13 307 IPR047021 GO:0004527
Pte15g00254 363 Pfam Exonuclease 135 298 IPR013520 -
Pte15g00254 363 CDD REX4_like 135 299 IPR037431 GO:0006364|GO:0008408
Pte15g00254 363 ProSitePatterns Zinc finger C2H2 type domain signature. 13 35 IPR013087 -
Pte15g00254 363 ProSiteProfiles Zinc finger C2H2 type domain profile. 11 40 IPR013087 -
Pte15g00254 363 SUPERFAMILY Ribonuclease H-like 135 301 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00254 Pte-Chr15 1843916 1847654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00254 10 357 C2H2 Transcription Factor Family AT3G27970 51.136 1.48e-122 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00254 K18327 - zju:107425975 474.937