Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00245 ATGATCCAACTTATAAGAGCACAGTCAAGTGGTTCTTCAATCTTGATTGTACTTAGGCTAGTTCAGGACGTAAAAGGGAAAAGTTTTGCGTTCCGAGTTGGATTCAATGATAATTGGGAAGAGCTAGAAGGGAAGAGCTATGATGATATTAGAAAAGCAACTGGAAATTTCTCCAGGGATAATATAATTGGGAAAGGAAGATATGGCAATGTGTATGAAGGGGTGCTACCAGATGGGTCTGAAGTTGCATTGAAAAGGTTTAGGAATTCCTCTGCAGCAAGTGGTGAAAGTTTCTCTCACGAGGTGGAAGTTATTGCCAGTGAGGCATCATTGGAGACAGCAAGAGGGCAGAGGGCTGGCTTATTTGCATCACGGGCTCAGCCAGCTGTTATCCATATGGCTATTAAAGCCGGTAATATTCTTCTTGATGAAAGGTTTGAAGTAAAGGTTGCTCATTTTGCACTTGCAAAGTTCACCCCCGAAGGAATAACACATTTTAAGAGCACCATGGTGGCAGCGACAATGGAATACGCTGCTCCTGAATATGCATTCTATGGCCAACTGACAGAGAGGAGTGATGTCCATAGTTTCAGTTTTGTGCTTTCAGAGCTTTTGAGTGCGAAGAAAGCTCTTCAAATGAACACAGAACCAACCGGATTCTGGGACTGA 669 0.4305 MIQLIRAQSSGSSILIVLRLVQDVKGKSFAFRVGFNDNWEELEGKSYDDIRKATGNFSRDNIIGKGRYGNVYEGVLPDGSEVALKRFRNSSAASGESFSHEVEVIASEASLETARGQRAGLFASRAQPAVIHMAIKAGNILLDERFEVKVAHFALAKFTPEGITHFKSTMVAATMEYAAPEYAFYGQLTERSDVHSFSFVLSELLSAKKALQMNTEPTGFWD* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00245 222 ProSiteProfiles Protein kinase domain profile. 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00245 222 PANTHER OS01G0750732 PROTEIN 125 214 - -
Pte15g00245 222 SMART serkin_6 57 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00245 222 Pfam Protein tyrosine and serine/threonine kinase 129 207 IPR001245 GO:0004672|GO:0006468
Pte15g00245 222 Gene3D Transferase(Phosphotransferase) domain 1 108 221 - -
Pte15g00245 222 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Pte15g00245 222 SUPERFAMILY Protein kinase-like (PK-like) 46 209 IPR011009 -
Pte15g00245 222 Gene3D Phosphorylase Kinase; domain 1 27 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00245 Pte-Chr15 1790543 1791505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00245 46 216 Receptor kinase-like Gene Family AT2G48010 49.327 2.11e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pte15g00245 PK_Tyr_Ser-Thr 2.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00245 - - tcc:18613431 201.06