Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00231 ATGGGTAGAACTGGTGAAAAGAGATCGGCGTCGACAGCACAGAGTCACACCTCTGCTGATAATCGGGGTGGGAAACGTAAAGACCAGGGTGTCGTTAACTTCGAGAGTTGTGCGAAAGATAACCTGTTTGATGATCTCTGGCATGTGTGCGCGGGTTCTCTCGTGTATGTTCCGAGGACAGGGGACAGGGTCGTTTACTTTCCTCAGGGTCACCTTGAACAGGTCCAAGCATGCACACCGCAAGATGGTCAAGTAGAAGTCCCAAATTACAATTTGCCCTATAAGATCATCTGTAAGGTTGTCAGTGTTAATCTGAAGGCTGAAGCTCACACCGATGAGGTATTTGCCCAAGTTACTTTGATTCCAGAGGGGAAGGAAGATGAGATCAATTCAGAGGAATGTTCTGATTCGTTGCCTCACAGGTCGAAGACAATATTTTGCAGTAAGACACTTACTCCATCAGACATAAGCACCCATGGTGGATTCTCTCTTCCTAGGCGACTAGCTGAAGAGTGCCTTCCTCCTCTGGATATGTCTCAGGATACACCATCACAAGAGATTGTTGCGGGGGACTTGCATGGGTTTAAATGGACTTTTCGTCATAAATATCGTGGGCAACCAAAAAGACACCTGATAACCAGTGGTTGGAGCACATTCGTGAATACGAAGAAGCTGGTTGCTGGAAATACTTGCATTTTCCTGAGGGGAGAAAATGGAGAACTACGAATTGGCATCCGCCGAGCAATGAAACAGCAAAGTGGCTCGCCAGCATCTATATTATCTGGCAATAGCATGCACCATGGGATATTGGCCAGTGCTTCCCACGCTATTTCCACCGGAACAAGGTTCATGGTGTACTATCGTCCATGGACAAGTCCATCTGAATTCATCATTCCATACAACCTATACAAGAAGTCGAGCAAAATCAATTACTCAATTGGAGTGCGACTTAGAATGCAGGTTGAAGCAGAAGAATGTCTGACAAAGAGATATAGAGGCACCATTGTTGGAATCAGAGATATTGATGGAGCTAAGTGGCCAAGTTCCGAGTGGAAACGCATTGAGGTGCAATGGGATGCTTCATCAGATGCATTTGTCGCTCCTAAAAATGTTTCACATTGGAACATAGAACCCCTAGACTTTCCTGCTGGGAAGTCCATTTCTTCAATTCAACCAAAGAGGAGAGATGTTTATGAGTCATCATTGCAAGAAGTTTCTACTCTCTCCCAGGGTGTGCAAATTTCGATCAACCACTCACCTCAGATATGCAATACCTTGCCATATCATGGAAATAAGCACTCAAGCGATGATGCACAGTATGAAGAAAGTTCATCTCTGTTGCCAGCTGACCTCTCCCTGGCAAAGCCTGCATACCAAACACATGCAAGAATGGAGAATTGTATGCACATTTTGCTGAATAACCCTCTTCAACAATGTTCCCCCAAACAATTATCTTTTCTAGATAAGAAGATATGTAATACAGGCCTCCCTTTTCAGTATCCTGTAAACATCCCCACTGATGCGGCATGTGACAGTGTGGCAGTTAGTAGAAATGTCTCACTGTCAAAAGAAATGTCGGTTGATTCAGGATCTCAGAAATGGGAGGATACTGAATCTCGAGACGTAAATGAAGATCTAATTCCCCAACCTGATGGTGCTTGCAAATTCAGGCTTTTTGGAGTAAACTTAGCAAATAGCCATCAGGAGCTCCCTTCACCACAAATTGCCTCTTCTGGCAAAAACAGTCCTCCTCCTGTTCCAACACCTCAGTCAAGCACAGCTGGAAATATTGAGGTTTCAGAAAACTCTAAAAGCATATCTGGTGCTGTACCTGAGAAACAGTGCAAGAAAACCGACATTACCAGTAGGAGCTGCTTCAAGGTGCTTAAACATGGAAGTCGTCTAGGAAGATCAATAGACTTCAGACGCTTTCATGATTATGATGAACTAATATCCGAGCTCGATCAAATGTTCGATTTCAAAGGAAGTTTGGTTGATAGGACCAGTGGATGGCTTGTGACCTACACTGATAACGTTGGAGACACAATGCTGGTTGGAGATTGCCCATGGCAAGATTTTCTGGCTGTGGTGCAAAAATTGTTGGTGTGTCCATTGGAGGCATTTGACAAACAGAATCCGGACTGA 2145 0.4448 MGRTGEKRSASTAQSHTSADNRGGKRKDQGVVNFESCAKDNLFDDLWHVCAGSLVYVPRTGDRVVYFPQGHLEQVQACTPQDGQVEVPNYNLPYKIICKVVSVNLKAEAHTDEVFAQVTLIPEGKEDEINSEECSDSLPHRSKTIFCSKTLTPSDISTHGGFSLPRRLAEECLPPLDMSQDTPSQEIVAGDLHGFKWTFRHKYRGQPKRHLITSGWSTFVNTKKLVAGNTCIFLRGENGELRIGIRRAMKQQSGSPASILSGNSMHHGILASASHAISTGTRFMVYYRPWTSPSEFIIPYNLYKKSSKINYSIGVRLRMQVEAEECLTKRYRGTIVGIRDIDGAKWPSSEWKRIEVQWDASSDAFVAPKNVSHWNIEPLDFPAGKSISSIQPKRRDVYESSLQEVSTLSQGVQISINHSPQICNTLPYHGNKHSSDDAQYEESSSLLPADLSLAKPAYQTHARMENCMHILLNNPLQQCSPKQLSFLDKKICNTGLPFQYPVNIPTDAACDSVAVSRNVSLSKEMSVDSGSQKWEDTESRDVNEDLIPQPDGACKFRLFGVNLANSHQELPSPQIASSGKNSPPPVPTPQSSTAGNIEVSENSKSISGAVPEKQCKKTDITSRSCFKVLKHGSRLGRSIDFRRFHDYDELISELDQMFDFKGSLVDRTSGWLVTYTDNVGDTMLVGDCPWQDFLAVVQKLLVCPLEAFDKQNPD* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00231 714 MobiDBLite consensus disorder prediction 591 609 - -
Pte15g00231 714 Gene3D - 145 249 IPR015300 -
Pte15g00231 714 MobiDBLite consensus disorder prediction 522 547 - -
Pte15g00231 714 ProSiteProfiles PB1 domain profile. 623 705 IPR000270 GO:0005515
Pte15g00231 714 MobiDBLite consensus disorder prediction 570 612 - -
Pte15g00231 714 MobiDBLite consensus disorder prediction 1 27 - -
Pte15g00231 714 Gene3D - 619 710 - -
Pte15g00231 714 FunFam Auxin response factor 310 382 - -
Pte15g00231 714 MobiDBLite consensus disorder prediction 1 19 - -
Pte15g00231 714 Pfam B3 DNA binding domain 149 248 IPR003340 GO:0003677
Pte15g00231 714 FunFam Auxin response factor 144 249 - -
Pte15g00231 714 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 41 703 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pte15g00231 714 SMART B3_2 147 249 IPR003340 GO:0003677
Pte15g00231 714 Gene3D - 310 382 - -
Pte15g00231 714 ProSiteProfiles B3 DNA-binding domain profile. 147 249 IPR003340 GO:0003677
Pte15g00231 714 SUPERFAMILY CAD & PB1 domains 615 699 - -
Pte15g00231 714 SUPERFAMILY DNA-binding pseudobarrel domain 142 276 IPR015300 -
Pte15g00231 714 CDD B3_DNA 146 247 IPR003340 GO:0003677
Pte15g00231 714 Pfam AUX/IAA family 669 702 IPR033389 -
Pte15g00231 714 MobiDBLite consensus disorder prediction 529 545 - -
Pte15g00231 714 Pfam Auxin response factor 273 353 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00231 Pte-Chr15 1714688 1720952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00231 611 713 B3 DNA Binding Superfamily AT5G62000 46.602 1.04e-23 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pte15g00231 AUX_IAA 1.3e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00231 - - qsa:O6P43_007108 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00231 15 1714688 1720952 Pte15g00231 15 1714688 1720952 RCT