Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00226 ATGACTGAATCTCCAGCATACCCAGACTCTTCTCCATTTGAAGATGAACACAGCCACCATATAAATTCAAGTGTAGTTGATCCAAAGCGTCCGTGTGATTACTGTGGCGACTGTACGGCACTTCTTTACTGCAGAGCTGACTCAGCTAAGCTGTGTCTCAACTGTGACAGAGAGGTTCACTCTGCTAATCAGCTCTTTTCTAAGCATACACGGACTCAGCTCTGTGATGTATGTGATGATTCCCCTGCTACTATACTATGTTCCACCGAGAACTCTGTTTTCTGTCAGAATTGTGACTGGGAAAGGCACAACCTTTCACTATCTCCACTTCACGAACGCAGGCCTATTGAAGGGTTCACCGGGTGCCCTTCTGTGGCTGAACTGTTGACGACTTTGGGCATGGAGGATTTGAGCAAGAAAGCTCTGGTTTTGACTGATGACGGTGGCTGTTACAACGGAGAGACTGATGGGTTTATAGGAAGTGAGTTTGATGGGCTATCAAACTTGTTGGACTGGGATCATGCACCTCCTTCTATTCTAAGTCTTGATGATTTGATTGTCTCTACAAATTTTTGTCACAATTACAACGCTATGGAAGTCCCTCCCCTGCCTAAGAATCGTAAGTGTGGCCAACACAAAAAAGAAATACTGAGTCAGCTTCGTCAACTAGCTAATAACTCAGAACCACGATTGAATTGCCGGGATGAGAATGATAGGTTCCTGAAAGACACGCAAGCCACGTTCACTGCAAATTTGCAGGAAAGCAACCGTTGTACAAGTTTTGAACGTGATAGCAAGGCTGATTTCTTGGTTTCTCAGGAGCTAGGTGAACTTCAGTACCATATTGATAATGGTGAGTTTGGACCTCATATTTTTCTTCCCAATGCACCATTAAGAAGCTATCCAAAGGAAAGTCCAGATGAGAATCATAGCAATGGCAATATAGGAAGGCAATCACAACCACCAGTTAACCCTCAGGACATACTGACGGATCCTAAAGTTGCTCCATACGAGTTATCTAGCCAAGAAAGAGATTCTGCTATATTGAGATACAAGGAGAAGAGGAAAACAAGAAGATATGAGAAGCACATTAGATATGAATCAAGGAAACTCCGTGCAGAGAGCAGGACGAGAATTAAAGGGCGATTTGCCAAGATAGAGCATTAA 1167 0.4362 MTESPAYPDSSPFEDEHSHHINSSVVDPKRPCDYCGDCTALLYCRADSAKLCLNCDREVHSANQLFSKHTRTQLCDVCDDSPATILCSTENSVFCQNCDWERHNLSLSPLHERRPIEGFTGCPSVAELLTTLGMEDLSKKALVLTDDGGCYNGETDGFIGSEFDGLSNLLDWDHAPPSILSLDDLIVSTNFCHNYNAMEVPPLPKNRKCGQHKKEILSQLRQLANNSEPRLNCRDENDRFLKDTQATFTANLQESNRCTSFERDSKADFLVSQELGELQYHIDNGEFGPHIFLPNAPLRSYPKESPDENHSNGNIGRQSQPPVNPQDILTDPKVAPYELSSQERDSAILRYKEKRKTRRYEKHIRYESRKLRAESRTRIKGRFAKIEH* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00226 388 MobiDBLite consensus disorder prediction 307 326 - -
Pte15g00226 388 MobiDBLite consensus disorder prediction 1 26 - -
Pte15g00226 388 Pfam B-box zinc finger 73 116 IPR000315 GO:0008270
Pte15g00226 388 CDD Bbox1_BBX-like 31 74 - -
Pte15g00226 388 ProSiteProfiles CCT domain profile. 344 386 IPR010402 GO:0005515
Pte15g00226 388 ProSiteProfiles Zinc finger B-box type profile. 70 116 IPR000315 GO:0008270
Pte15g00226 388 MobiDBLite consensus disorder prediction 10 26 - -
Pte15g00226 388 ProSiteProfiles Zinc finger B-box type profile. 27 74 IPR000315 GO:0008270
Pte15g00226 388 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 31 385 - -
Pte15g00226 388 Pfam CCT motif 344 385 IPR010402 GO:0005515
Pte15g00226 388 SMART bboxneu5 75 116 IPR000315 GO:0008270
Pte15g00226 388 SMART bboxneu5 27 74 IPR000315 GO:0008270
Pte15g00226 388 MobiDBLite consensus disorder prediction 298 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00226 Pte-Chr15 1685571 1688413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00226 30 359 C2C2-CO-like Transcription Factor Family AT2G47890 39.763 1.70e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Pte15g00226 zf-B_box 1.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00226 - - qsa:O6P43_010720 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00226 15 1685571 1688413 Pte15g00226 15 1685571 1688413 RCT