Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00196 ATGGCCTCAGCGATTAACCAAACGGCAGAGAGCATTGTTGGTATTTCAAATAATATGGGGCATGAAAAATGTCACAGTTTCTTTCTTTTCAGGGGTGAAATTGCTCTTGGAGATTCGTTTCGAGCCTGCCTCTATCTTCTAGGGCTTTCTTACTGTTTCATTGGATTGTCCGCTATAACTGCTCGTTTTTTCCGCTCTATGGAAAATGTTGTGAAGCACACGAAGGAAGTGGTGGACATAGATCCACACACTGGTGAAGAAATCATTAGACAAGAAAAGGTCTGGAATTACACAATTGCAGATATCAGTCTGCTGGCATTTGGAACTAGCTTTCCTCAGATATCCTTAGCCACTATTGATGCCATTAGAAACTTGGGAAATTTAAATGCTGGAGGCTTGGGCCCCGGAACACTTGTTGGCTCTGCAGCATTCGATCTGTTCCCCATACATGCTGTTTGTGTTGTAGTCCCAAAAGCTGGAGAACTGAAAAAGATTTCTGATTTAGGAGTATGGCTAGTGGAGCTCATCTGGTCATTTTGGGCTTATGTATGGCTATATATTATATTGGAGGTCTGGACTCCAAATGAGGTGACTTTGTGGGAGGCCTTACTGACAGTACTTCAATATGGATTACTGCTGCTGCATGCCTATGCTCAAGATAAACGTTGGCCCTATATCTCTCTTCCTATTGCAAGAGGCGAGAGACCAGAGGACTGGGTACCAGCAGAAGTTTCACCACACAAACAAGAAAACAGTGTCTATGATGAGTACTCTGAGATTAATGATATTAATGAATATGAAAGCGCTGGAATTGTGGATATATTTGGGATTCATTCAACAAATGCGGTTGATCCAGTGTATGAAATAGTCCCTCGAGCAGATGAGCGTGCTGAATTCTCTAATAAAGAAAAGGGTACTCTGAGCCATCCTCCTCATGTGCTCACACTTTGGAGGAAGCAATTTGTTGATGCACTCAAGTTGGAAAGTACAGAATCGAGAAAACTAAACAACAACTATCTAAGAACCGCAAGTATTGTCTGGAAGTTGCTGCTTTCACCTTGGAAGTTTCTATTTGCTTTTGTACCTCCATATGATATTTCACACGGTTGGGTTGCTTTCATTTGCTCTCTGATTTTCATCAGTGGAATAGCTTACGTAGTGACAAGGCTTACTGATCTAATAAGCTGTACCACAGGAATACATCCTTATGTAATCGCATTTACAGCATTAGCAAGTGGAACATCATGGCCAGATTTAGTGGCAAGTAAGATTGCTGCTGAACGTCAGTTAACAGCTGACTCTGCCATTGCAAACATCACTTGCAGCAATTCAGTGAACATATATGTTGGGATTGGTGTTCCTTGGTTAATTGACACCATATACAACTTCGTTGCATACAGAAAGCCATTCGACGATGCTGTTGCACTGCGCCATTTAGCATCTTCTTCAGCAGACCACCATTGGAAACACCATGAAGTGCCTCAGACCACCATTCATAGCCTTGAATACCCAGTCTATATCATCAATGGAGTTATAACGACATTCACAGCTATATCAAGTTATTACTACTTTTCTGACAAAAAGGTTGCCGGGACTTCAAGGTGGCTCTGGTTGCTGGGGCTGGAGCTTCTCGATGGCTCTGGTTGCGGGGAAGGACGAAGGTCGAGGGGGACAGAGTGTGATGATTATGAGGATGTATGGAGGGAGATTCAGTTTGGGGGGGGGGGGGAGAATGAGGCAGAGACTGCTCCTCAAATCTGGTTGCGGCAGCTTGGGGCTTCTCGGCTCTAG 1791 0.4366 MASAINQTAESIVGISNNMGHEKCHSFFLFRGEIALGDSFRACLYLLGLSYCFIGLSAITARFFRSMENVVKHTKEVVDIDPHTGEEIIRQEKVWNYTIADISLLAFGTSFPQISLATIDAIRNLGNLNAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDLGVWLVELIWSFWAYVWLYIILEVWTPNEVTLWEALLTVLQYGLLLLHAYAQDKRWPYISLPIARGERPEDWVPAEVSPHKQENSVYDEYSEINDINEYESAGIVDIFGIHSTNAVDPVYEIVPRADERAEFSNKEKGTLSHPPHVLTLWRKQFVDALKLESTESRKLNNNYLRTASIVWKLLLSPWKFLFAFVPPYDISHGWVAFICSLIFISGIAYVVTRLTDLISCTTGIHPYVIAFTALASGTSWPDLVASKIAAERQLTADSAIANITCSNSVNIYVGIGVPWLIDTIYNFVAYRKPFDDAVALRHLASSSADHHWKHHEVPQTTIHSLEYPVYIINGVITTFTAISSYYYFSDKKVAGTSRWLWLLGLELLDGSGCGEGRRSRGTECDDYEDVWREIQFGGGGENEAETAPQIWLRQLGASRL* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00196 596 Gene3D - 325 541 IPR044880 -
Pte15g00196 596 PANTHER SODIUM/CALCIUM EXCHANGER 19 226 - -
Pte15g00196 596 Gene3D - 97 233 IPR044880 -
Pte15g00196 596 Pfam Sodium/calcium exchanger protein 45 217 IPR004837 GO:0016020|GO:0055085
Pte15g00196 596 Pfam Sodium/calcium exchanger protein 368 463 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00196 Pte-Chr15 1396595 1403311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00196 1 470 Antiporters AT2G47600 70.464 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00196 K03452 - qsu:111993047 701.819