Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00193 ATGGACATCGAATCCCATCCCAACTATGCCATCAATGGAAAAATAATGCTTATCTCTTCCATCTTAGTCTTTGGAGTCGTACTCTTCTTATTAATCTTCCACAGGTACATACGCCGCTGCTTCCTTCGCTTCCGCCATACTAATCTATTTTCCAGCACGCTGAATAACAGTAGCAGCAGTTCTACCTCTACCGTACCGTCTCACAAAAAGGAAGGACTTGACGCTTCCATTCTGAAAAACCTTCCAATCTTCACTTACCACTGTCCAAGCAAGAACTTTTCATGCCACCCTTTGCAAGAGTGTGTAGTCTGCTTATCAGAGTTCCAAGACAAAGACAGGGCTCGCTTCTTGCCTTGCTGTAACAACACTTTCCACGCTTATTGTATAGACACATGGTTTCACTCTAACTCTACCTGCCCTCTCTGCCGGGCGCCGGTTCATCTGCCGCAAGGTCCAGTCCAACCGCCGAAAGGTTTCTCGGCTGAACCGCTGTGTTCAGACCACGAACCGGGTTGCTCTCGCTCTTCCCTTCCTCAAGCGATCTGGTGTCCAAGAAAGCCATCGGAACGGATAGACATAGTTGTGGAGGTGCCTATTGTGGCAGGGGACGACGTATTGAGAGAACCCGATTGCGTGGGCGCGGGTGCACCCGGCGAGAACCCGTTCAAGCACCACCTGTTCTCATCATTGAAGAAGATATCTAGCAAGTAG 711 0.4937 MDIESHPNYAINGKIMLISSILVFGVVLFLLIFHRYIRRCFLRFRHTNLFSSTLNNSSSSSTSTVPSHKKEGLDASILKNLPIFTYHCPSKNFSCHPLQECVVCLSEFQDKDRARFLPCCNNTFHAYCIDTWFHSNSTCPLCRAPVHLPQGPVQPPKGFSAEPLCSDHEPGCSRSSLPQAIWCPRKPSERIDIVVEVPIVAGDDVLREPDCVGAGAPGENPFKHHLFSSLKKISSK* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00193 236 SUPERFAMILY RING/U-box 100 152 - -
Pte15g00193 236 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 148 IPR013083 -
Pte15g00193 236 Pfam Ring finger domain 100 143 IPR001841 -
Pte15g00193 236 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Pte15g00193 236 SMART ring_2 101 142 IPR001841 -
Pte15g00193 236 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 8 147 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00193 Pte-Chr15 1386957 1388674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00193 8 151 Rapid Response to Elicitors AT3G16720 40.385 3.70e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00193 - - qsa:O6P43_007193 146.362