Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00190 ATGGTATTATTGATTGTGACGTTGTATATGTTATTGTTATCGTTGTCTTTACCCAATGCTGAGTTCCGTGACCCGAGAAAAGGGTTTCGTGTTTGGCTTGGTACGTTCACCACTGCTGAAGAAGCTGCTAGAGCCTATGACAGAGAAGCAGGCAAGATACGTGGAAAGAAAGCCGAAGTCAATTTCCCCTATGAAGATGACGCCTACGCTATGCAAGCCCATTACAATCCATCACAGCCTCCACGTCCACCTCTTGGACACCTCAATCATCCTTCTCCATATACATGTTGCGATGCCAGTGGTAGTCTGAATAATGTCTCCAAAAACCTGAATTTGGGGTTTGTATATGATCTCAATCAGATGGCTGCAATCCCTGAGACCGTGTTTGGTGCTCCCGATGCCGAACCTGTTGGTATTTCATGGTGA 426 0.4577 MVLLIVTLYMLLLSLSLPNAEFRDPRKGFRVWLGTFTTAEEAARAYDREAGKIRGKKAEVNFPYEDDAYAMQAHYNPSQPPRPPLGHLNHPSPYTCCDASGSLNNVSKNLNLGFVYDLNQMAAIPETVFGAPDAEPVGISW* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00190 141 Gene3D AP2/ERF domain 19 65 IPR036955 GO:0003700|GO:0006355
Pte15g00190 141 CDD AP2 20 64 IPR001471 GO:0003700|GO:0006355
Pte15g00190 141 SMART rav1_2 18 69 IPR001471 GO:0003700|GO:0006355
Pte15g00190 141 ProSiteProfiles AP2/ERF domain profile. 20 63 IPR001471 GO:0003700|GO:0006355
Pte15g00190 141 SUPERFAMILY DNA-binding domain 20 64 IPR016177 GO:0003677
Pte15g00190 141 PANTHER DNA-BINDING DOMAIN 20 76 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00190 Pte-Chr15 1375198 1377876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00190 20 65 AP2-EREBP Transcription Factor Family AT1G72360 76.087 2.85e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00190 K09286 - qsa:O6P43_010814 121.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00190 15 1375198 1377876 Pte15g00190 15 1375198 1377876 RCT