Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00172 ATGGGACTAGCTCCAAAACCCCTTATCGCCTCCCTTGATTTGAAAGATCTGCTTCAAAGGGCTATATGCGAAAACGATTACGAGACGTGCGGAGTTTTGTGGGGTAAGGTGTTGGCAGCAAAAGCCAAGAAGAAACCACAAAAGAAGCGCAGTGCTGTAAGAGAACTTTCCAAAAGCAAGAGATCATCAACAAGGGTTTTGATGAAGAGGAGGGCACGTTTAGAAGGTTGTAGAAGACACAGCAGCGGGATGGAGAGGAGGGTTAGAACTTTGAAGAGGCTTATACCAAAAAGCGAGTCCGTAGGGTTGGAGGGACTCTTCAGAGAGACAGCTGATTATATTTTGTCTTTGGAGATGAGAGTGAGAGTTATGCAGATTATGGTGGATGCCTTGACAACTTCTAAAGATGATCAGAATTGA 420 0.4476 MGLAPKPLIASLDLKDLLQRAICENDYETCGVLWGKVLAAKAKKKPQKKRSAVRELSKSKRSSTRVLMKRRARLEGCRRHSSGMERRVRTLKRLIPKSESVGLEGLFRETADYILSLEMRVRVMQIMVDALTTSKDDQN* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00172 139 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 37 131 IPR044660 GO:0006355
Pte15g00172 139 CDD bHLH_AtIBH1_like 73 128 IPR044549 GO:0006355
Pte15g00172 139 MobiDBLite consensus disorder prediction 45 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00172 Pte-Chr15 1269543 1270348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00172 65 134 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 50.704 1.72e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00172 - - zju:112492978 118.627