Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00168 ATGGATGCGAAAGACATACTGGGGTTGCCCAAAAACTCTTTGCCTCTTCAGCAGGAGAAAAAGTCTCGGTCTCAGAAGGATTCTCAAAGAAAGCCAGATGGCATTTCACGAGAGGTATATGCGCTTACCGGTGGTTTGGCACCACTTATGCCTGCCGTGGAACCTTCTCAATTGAAGAAACGACCCCCTTCTGATGAGAAGATCACTTGGCAATGGCTTCCATTTACTAGTTCTGCTCGCAAAGATAATCTCCAGCTTTACCACTGGGTCAGAGTTGTGAATGGTGTTCCACCAACTGGGGACTATGCATTTGCCAAGTATAATAAATCCGTTGACCTTATCAAATACACAGATGAAGAGTATGAGAAGCATTTAACAGATCCTAAATGGACCAGGGAGGAGACAGATCAACTATTTGACTTGTGTGAGAGGTTTGACCTGCGCTTCGTTGTTATAGCCGATAGGTTCCCCTCTTCACGATCAGTGGAGGAATTAAAGGACCGTTATTACAATGTGTCTCGTTCCATTTTAATTGCCCGGGCTCCATCTCCTGGTGAGGTTGCAACACATCCTATCATTAAGGAACCTTATAACATTTCACAAGAGATAGAGAGGAAACGTGCATTGTCCATGGTCCTCTCTCAAACGAAGCAGCAAGAGAAAAAAGATGCTGAGGTTCTTGCTGAAGCAAAAAGGATAACCGAGTCGCGCATGCTAGCAAAGGGTGCAGAAGAGCCTGAATTGGCTATTACACCAAATGCGGGTCCAGAAGGTGCAGAAGGCTCTGTGCCCGGTGGTGACACAGTATCGCCATCAAGTATACTGTTTCCTTCAGCAGTTGTTCCTCAAGTACCAAACACAGATAATGCAGCTACTCTTGCTTCTCTTCGCATACTTCGTGTTTATTTGAGAACATATGCCCTTGAGCAAATGGTGCAAGCTGCAAGTTCATCTGCAGGCCTTCGGACTATCAAACGTGTCGAGCAAACTTTACAAGAACTTGGGGTTAATTTAAAACCGAGAGTTCCGACTAAAGCTGTGTGCGCTGAGCATCTTGAATTAAGAAAAGAAATATTAACTCTGCTGAATCTCCAGAAACAGCTACAATACAAGGAAGCAGAGGGGTCTTCTTTTCGTGATGGCTCTTATGCTGATACTCCTGGGACACCTAAGCGTTCACACCGAGCTGAGCAAGATCGGACATTTGTTCCAGATTCAATGAATTTTGGAGGGGATAGGATTGGGAAAAGAGAACAGAAACGCAAGGTACCTGGAAGACTATCAGAAACTCCTTCATCCCCAGCTCATAAAAGGCCTAGAAAACTGAAGGCTTCTGATCTGTAG 1344 0.4501 MDAKDILGLPKNSLPLQQEKKSRSQKDSQRKPDGISREVYALTGGLAPLMPAVEPSQLKKRPPSDEKITWQWLPFTSSARKDNLQLYHWVRVVNGVPPTGDYAFAKYNKSVDLIKYTDEEYEKHLTDPKWTREETDQLFDLCERFDLRFVVIADRFPSSRSVEELKDRYYNVSRSILIARAPSPGEVATHPIIKEPYNISQEIERKRALSMVLSQTKQQEKKDAEVLAEAKRITESRMLAKGAEEPELAITPNAGPEGAEGSVPGGDTVSPSSILFPSAVVPQVPNTDNAATLASLRILRVYLRTYALEQMVQAASSSAGLRTIKRVEQTLQELGVNLKPRVPTKAVCAEHLELRKEILTLLNLQKQLQYKEAEGSSFRDGSYADTPGTPKRSHRAEQDRTFVPDSMNFGGDRIGKREQKRKVPGRLSETPSSPAHKRPRKLKASDL* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00168 447 MobiDBLite consensus disorder prediction 1 37 - -
Pte15g00168 447 FunFam DNA methyltransferase 1-associated protein 1 98 185 - -
Pte15g00168 447 SUPERFAMILY Homeodomain-like 125 178 IPR009057 -
Pte15g00168 447 MobiDBLite consensus disorder prediction 411 425 - -
Pte15g00168 447 Gene3D - 99 184 - -
Pte15g00168 447 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 1 430 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Pte15g00168 447 Pfam SANT/Myb-like domain of DAMP1 102 176 IPR032563 -
Pte15g00168 447 Pfam DNA methyltransferase 1-associated protein 1 (DMAP1) 317 386 IPR008468 GO:0005634|GO:0045892
Pte15g00168 447 MobiDBLite consensus disorder prediction 375 447 - -
Pte15g00168 447 MobiDBLite consensus disorder prediction 433 447 - -
Pte15g00168 447 MobiDBLite consensus disorder prediction 241 268 - -
Pte15g00168 447 SMART sant 126 175 IPR001005 -
Pte15g00168 447 MobiDBLite consensus disorder prediction 20 34 - -
Pte15g00168 447 CDD SANT_DMAP1_like 130 172 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte15g00168 DMAP1 5.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00168 K11324 - tcc:18613747 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00168 15 1241645 1248292 Pte15g00168 15 1241645 1248292 RCT