Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00164 ATGGCATCAGTGGGTGTTGCTCCCACTTCTGGGTTGAAAGATGCCACTGGGACTTCAATTGATGTTGCTACGTTGCTTGAGGACATGAATGAAATAAAAATCAAGGATGAAAAAGAAATGGATACAGCGGTGGTTGATGGTAATGGAACAGAGACAGGACATTTAATTGTCACTACTATTGGTGGTAAAAACGGCCAGCCTAAGCAGGCGATAAGCTATATGGCTGAGCATGTTGTTGGGAATGGATCCTTCGGTGTTGTATTCAAGGCAAAATGCTTGGAGACAGGTGAGACTGTTGCCATTAAAAAGGTTCTTCAAGACAAGAGGTACAAGAATCGGGAACTGCAAACCATGCGTCTTCTTGATCATCCAAATGTTGTAGCTTTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGAGGAACTTTATCTTAATTTGGTGCTTGAGTATGTACCTGAAACTGTTCATCGTGTAATCCGGTTCTACAACAAAATGAACCAGAGGATGCCAATGATTTATGTGAAGCTTTACTTTTACCAGATATGCAGAGCTCTTGCTTACATTCACAATAGCATTGGAGTGTGCCACAGAGATATAAAGCCACAAAATTTGTTGGTCAGTCCTACTACCCACAAGTTGAAGTTATGTGACTTTGGAAGTGCGAAAGTCCTGGTAAAAGGGGAGCCAAACATATCATACATCTGTTCTAGGTACTATAGAGCACCTGAACTGATATTTGGTGCAACTGAGTACACAACAGCAATTGACATCTGGTCTGCTGGTTGTGTTCTCGGTGAACTATTGCTCGGAAAGCCCCTGTTTCCTGGTGAGAGTGGAGTAGACCAGCTTGTGGAAATAATTAAGGTTCTTGGTACCCCAACGAGAGAAGAAATTAAGTGCATGAATCCTAACTACACTGAGTTTAAATTTCCACAAATCAAAGCGCACCCATGGCACAAGATATTTCAGAAAAGAATGCCCCCTGAAGCTGTGGATCTTGTCTCAAGACTTCTACAGTACTCTCCAAATCTTAGGAGCACAGCTCTGGATGCTCTGGTTCACCCGTTTTTTGATGAGCTAAGAGACCCCAATACCCGACTACCTAATGGGCGTGTCTTTCCTCCATTATTTGATTTCAAAGCACATGAAATGAAGGGAGTGCCAGCTGAGATGTTGGTGAAGCTAGTTCCACCTCATGCAAGAAAGGAGTGCCCCTTGTTTGGGTCCTAA 1230 0.4285 MASVGVAPTSGLKDATGTSIDVATLLEDMNEIKIKDEKEMDTAVVDGNGTETGHLIVTTIGGKNGQPKQAISYMAEHVVGNGSFGVVFKAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVALKHCFFSTTEKEELYLNLVLEYVPETVHRVIRFYNKMNQRMPMIYVKLYFYQICRALAYIHNSIGVCHRDIKPQNLLVSPTTHKLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLGELLLGKPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALDALVHPFFDELRDPNTRLPNGRVFPPLFDFKAHEMKGVPAEMLVKLVPPHARKECPLFGS* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00164 409 CDD STKc_GSK3 71 360 IPR039192 -
Pte15g00164 409 FunFam Shaggy-related protein kinase kappa 153 401 - -
Pte15g00164 409 Gene3D Phosphorylase Kinase; domain 1 57 152 - -
Pte15g00164 409 Pfam Protein kinase domain 74 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00164 409 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 37 402 - -
Pte15g00164 409 FunFam Glycogen synthase kinase-3 beta 57 152 - -
Pte15g00164 409 ProSiteProfiles Protein kinase domain profile. 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00164 409 ProSitePatterns Protein kinases ATP-binding region signature. 79 103 IPR017441 GO:0005524
Pte15g00164 409 SMART serkin_6 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00164 409 SUPERFAMILY Protein kinase-like (PK-like) 73 384 IPR011009 -
Pte15g00164 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Pte15g00164 409 Gene3D Transferase(Phosphotransferase) domain 1 153 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00164 Pte-Chr15 1197105 1201294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00164 79 385 MAP Kinase Gene Family AT2G43790 36.050 2.63e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pte15g00164 Pkinase 2.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00164 K27413 - qsa:O6P43_007300 734.561