Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00161 ATGGAGGCTACAGTTGACAGAGAAAGTCTTCATTTTTATGGTATGGCTCCCCCAGATTTGAGAGTAGTAGGAAAGAGGCCAGTTGAATGGAATTTGAACGATTGGAGGTGGGATGGTGACCTCTTCATAGCTAGCCCTTTAAATCCACTTCCTTCTCATGGTGTAAGCCAGCAGTTTTTCCCTCTAGGTTCTGAGATTCCTGAGAATGGCACGTCGTCTAACAGTTCCTCATCTTGCTGTGATGAAGTAAGCCTTGGAATGGATAAGGGAAAGAGAGAATTGGACAAGAAAAGGAGAGCTTGTGCGGTGGAAGAGGACAGTGGAAACGAAGAAACTGGGAATCTTACCTTGAAGCTTGGTGGCCATAGTTATCCTTCTGCTGATAAGGAAGAAGCAAATTTGGATAGGAGTGGTGGGAAGAAAACCAAATTGGCAGGAGTTGCGTCAAATCGATCTGTTTGTCAGGTAGAGGACTGTGGTGCCGATTTGAGCAAAGCCAAGGATTATCATCGGCGCCATAAAGTTTGTGAGATGCACTCAAAGACCAGTAGGGCACTTGTGGCTAATGTCATGCAACGGTTCTGTCAGCAGTGTAGTAGGTTTCATGTGCTTGAAGAGTTTGATGAAGGGAAAAGAAGTTGTCGAAGACGTTTGGCTGGCCACAATAAGAGACGAAGGAAAACAAACAACGAGTCTGTTCCCAGTGGAAGTTCACCGAACGATGATCAGGCTAGCAGTTATCTGTTAATGAATGTATTGCGGATACTTTCCAACATGCATTCTAATAAATCTGACAAGACCGGCGACCAGGATTTGTTATCCCATCTTCTAAAGAGCCTTGCCAGTCAAAATGGAGACCATGGGTCTAAGAATATGTCTTCTCTAATGCTTGAATCCCAGAATTTGCTAAAAGATTCAAATTCATCTGGAAAGTCAGTTATGACTTCCACCTTGGTTACAAATTGTTCACAAGACCCTCCAGGCCTTCTCAGAAAGCAGCAAACACTACCTTCATCTGAACTGCAACATGGTCATGATTCTAGGGATGCTGATATAGGCCCTATGCCTCACACAAAAACCAGTATCTTGGGCAGCCCTTCAGCTTATTCTGAAGTCAGGGAGAGTACTTCTGGGCAAATAAAAATGAACAATTTTGATTTGAATGACATATATATTGATTCGGATGATGGGACTGAAGATGTGGAGAGATCACCTGCCACTGCAAATGTGGGGACGAGATTTGTTGATTACACTTGGGCACAAGACTCTCATCAATCAAGCCCCCCTCAGACAAGTGGAAACTCAGATTCAGCATCTGCTCTGTCTCCATCTAGTTCCAGTGGGGAAGCTCTGAGCCGTACAGATCGGATTGTTTTTAAGCTTTTCGGTAAAGAACCAAATGATTTCCCGCCTTTTCTTAGAGCACAGATGCTTGACTGGTTGTCACACAGTCCGACTGACATGGAAAGCTACATTCGGCCTGGCTGTATCATTTTGACAATGTACTTGCGCCAGCCTGAGGCTGCATGGGAGGATCTCTGTGATGACTTGAGTTCCAGTTTAAGAAGGCTTGTAGATGTCTCAGACAATAACTTCTGGAGAAGTGGTTGGATGTTCATCAGAGTGCAACATCAGATAGCCTTTATTTTCAATGGTCAGATTGTCATTAACTCATCTTTGCCTTTCACAAGTGTCAATCAGAGTAAAATTTTGAATGTTCAACCAATAGCAGTATCTCCATCTAAGAAAGCTCAATTTACAGTCAACGGCATTAACCTCATTCAACCTGCTGCAAGGTTACTCTGTGCACTGGAAGGAAAATATCTGGTCCACGAAGCTACTCATGAGTCGAGAGATGATCCTGAATGCTCTGAGTTTGATGAGCTTGAGTGCATCAAATTTTCATGTTCTATTCCTTCAATGAATGGAAGAGGATTTATTGAGATTGAAGACCAGGGTCTTTGCTGCAGCTTCTTTCCTTTCCTAGTTGTGGACGAGAATGTTTGCTCTGAAATCCGAGTGCTCGAGACTCTATTGGGATCAGATGACAATTATGCAGATAATGAAGTGGCTGGGAAAATGGAAGCCAAGAATGAAGCAATGGAGTTCATTCATGAGATGGGTTGGCTTCTACATAGAAGTCAATTGAAGTCCAGATTAAGTAACTTGGATATGAATGCAGAGTCATTTCCTTTAAAACGTTTCAAGTGGCTTATGGAGTTTTCTGTGGACCATGACTGGTGTGCGGTGGTTCAGAAACTGTTGAACATTATGCTTAATGGAAATGTTGGAACAGGGGAACACCCATCACTATATCGTGCACTATCTGAGATAAACCTTCTTCATAGAGCTGTAAGGAAGAATAGCAGACGATTGGTGGAGTTACTTCTGACATATGTTCCTGAAAGCATATCAGAAAATCTGGAGCCGGAAGATGAGATATTACTTGGTGGTGAGGACAAAAGATACTTGTTCAGACCTGATGTTGCTGGCCCTGCAGGTTTGACACCTCTCCATATTGCTGCTGGTAAAGATGATTCTGAGGACGTGCTTGATGCTTTAACTGAAGATCCTGACATGGTGGGAATTGAAGCTTGGAAGAATGCTCGTGACTGTACAGGATCCACTCCTGAAGATTATGCTAGGTTGAGAGGCCATTACAGTTACATCCACCTTGTGCACAGAAAAATCAACAAGAGTCAGAGAGTTAGCCATGTGGTGGTAGAAATTCCCAGTGCTGTCACGGACGGTGGTAACATAAACCACAAGGAAAATGAGTCCGTTGCTGGCTTTGAGATCGGGAAAGCCGCGCAAAAATATGCACAAGGGCAGTGTAAGCTCTGTGATAGTAAATGGACTCAGAGAATAGCAGGTGCCAGGTCTGTGGTGTACAGGCCTGCAATGCTTTCAATGGTGGCCATTGCAGCAGTATGTGTCTGCGTGGCCCTTCTGTTCAAAAGCGCACCTCAAGTTCTGTATCCATTCCGACCTTTCAGTTGGGAGTCATTAGATTACGGAACTATTTAG 3027 0.4381 MEATVDRESLHFYGMAPPDLRVVGKRPVEWNLNDWRWDGDLFIASPLNPLPSHGVSQQFFPLGSEIPENGTSSNSSSSCCDEVSLGMDKGKRELDKKRRACAVEEDSGNEETGNLTLKLGGHSYPSADKEEANLDRSGGKKTKLAGVASNRSVCQVEDCGADLSKAKDYHRRHKVCEMHSKTSRALVANVMQRFCQQCSRFHVLEEFDEGKRSCRRRLAGHNKRRRKTNNESVPSGSSPNDDQASSYLLMNVLRILSNMHSNKSDKTGDQDLLSHLLKSLASQNGDHGSKNMSSLMLESQNLLKDSNSSGKSVMTSTLVTNCSQDPPGLLRKQQTLPSSELQHGHDSRDADIGPMPHTKTSILGSPSAYSEVRESTSGQIKMNNFDLNDIYIDSDDGTEDVERSPATANVGTRFVDYTWAQDSHQSSPPQTSGNSDSASALSPSSSSGEALSRTDRIVFKLFGKEPNDFPPFLRAQMLDWLSHSPTDMESYIRPGCIILTMYLRQPEAAWEDLCDDLSSSLRRLVDVSDNNFWRSGWMFIRVQHQIAFIFNGQIVINSSLPFTSVNQSKILNVQPIAVSPSKKAQFTVNGINLIQPAARLLCALEGKYLVHEATHESRDDPECSEFDELECIKFSCSIPSMNGRGFIEIEDQGLCCSFFPFLVVDENVCSEIRVLETLLGSDDNYADNEVAGKMEAKNEAMEFIHEMGWLLHRSQLKSRLSNLDMNAESFPLKRFKWLMEFSVDHDWCAVVQKLLNIMLNGNVGTGEHPSLYRALSEINLLHRAVRKNSRRLVELLLTYVPESISENLEPEDEILLGGEDKRYLFRPDVAGPAGLTPLHIAAGKDDSEDVLDALTEDPDMVGIEAWKNARDCTGSTPEDYARLRGHYSYIHLVHRKINKSQRVSHVVVEIPSAVTDGGNINHKENESVAGFEIGKAAQKYAQGQCKLCDSKWTQRIAGARSVVYRPAMLSMVAIAAVCVCVALLFKSAPQVLYPFRPFSWESLDYGTI* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00161 1008 MobiDBLite consensus disorder prediction 360 377 - -
Pte15g00161 1008 SUPERFAMILY SBT domain 153 231 IPR036893 GO:0003677|GO:0005634
Pte15g00161 1008 Gene3D - 749 908 IPR036770 -
Pte15g00161 1008 MobiDBLite consensus disorder prediction 218 244 - -
Pte15g00161 1008 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 70 892 IPR044817 GO:0003677
Pte15g00161 1008 SUPERFAMILY Ankyrin repeat 777 891 IPR036770 -
Pte15g00161 1008 ProSiteProfiles Zinc finger SBP-type profile. 151 228 IPR004333 GO:0003677
Pte15g00161 1008 FunFam Squamosa promoter-binding-like protein 14 145 215 - -
Pte15g00161 1008 MobiDBLite consensus disorder prediction 320 341 - -
Pte15g00161 1008 Gene3D - 145 215 IPR036893 GO:0003677|GO:0005634
Pte15g00161 1008 MobiDBLite consensus disorder prediction 124 138 - -
Pte15g00161 1008 MobiDBLite consensus disorder prediction 119 138 - -
Pte15g00161 1008 MobiDBLite consensus disorder prediction 320 377 - -
Pte15g00161 1008 MobiDBLite consensus disorder prediction 421 449 - -
Pte15g00161 1008 Pfam SBP domain 154 227 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00161 Pte-Chr15 1171471 1177921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00161 1 1007 SBP-box Gene Family AT3G60030 54.078 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pte15g00161 SBP 4.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00161 - - gmx:100814273 1316.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00161 15 1171471 1177921 Pte15g00161 15 1171471 1177921 RCT