Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00160 ATGTTGGGACCCAGGATCGCCATAATGAGTTGCTTCGGTTGCTGTGAAGAAGATCACATGCTTAAAGCTGCCGAGAGTGGAGGCCCGTACATGACAAAGAATACAGCAGGAAATAATGGAGATTACCGTGCATCAGAAGCTGCATCCAAGGGCTTTGATACAGTGAAACCCCAGCCTATTGAAGTTCCTGCCATCTCTGTGGACGAACTAAAGGAAGTCACAGATTCTTATGGAACAAATTCTTTGATTGGAGAGGGCTCCTATGGAAGAGTATATTATGGAGTTCTCAAAAATGGATTGCCTGCAGCAATTAAGAAATTAGATTCTAGCAAACAGCCTGACGAAGAATTTTTAGCTCAAGTTTCAATGGTATCCAGAATGAAGCATGAGAACTTTGTCAGGCTGCTAGGTTATTGCATTGATGGAAGCTCTCGTGTTTTAGCTTATGAGTTTGCATCTAATGGATCTCTTCATGATATCTTGCATGGAAGGAAAGGAGTGAAAGGAGCCCAGCCTGGACCTGTTCTGTCATGGGCACAGAGAGTGAAAATTGCTGTTGGGGCTGCTAAGGGACTCGAGTACTTGCACGAGAAGGCTGATCCTCACATCATCCACCGGGATATCAAGTCAAGCAATGTATTAATTTTCGATAATGATCTTGCAAAGATTGCAGACTTTGATTTGTCAAATCAGGCTCCTGATATGGCTGCTCGCCTTCATTCTACTCGTGTTCTTGGAACCTTTGGTTATCATGCTCCTGAATATGCAATGACTGGACAGCTGAATGCTAAGAGTGATGTGTACAGCTTTGGTGTGGTGCTTTTGGAACTGTTGACCGGGAGAAAACCAGTTGATCATACACTTCCACGAGGACAGCAGAGTCTAGTTACTTGGGTATGCCCTCTCCCCCTACTACCACCACCTCTTCAATCAAACACACAGAAAGACGGCAACATTTTTTTTTTTGGCTGTTCATTACAATACCACAAGTATGCACACAATTACGACAATGAAAGAAAAGGAATGGGAAAACAATTGACTTTGGGTCTTAAATCCCTCTTTTATTCCTGTTCCAGTATATTCAATTGTTACATGAATTGGATTTGTGTAGGCTACTCCAAAATTGAGTGA 1131 0.4271 MLGPRIAIMSCFGCCEEDHMLKAAESGGPYMTKNTAGNNGDYRASEAASKGFDTVKPQPIEVPAISVDELKEVTDSYGTNSLIGEGSYGRVYYGVLKNGLPAAIKKLDSSKQPDEEFLAQVSMVSRMKHENFVRLLGYCIDGSSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDNDLAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWVCPLPLLPPPLQSNTQKDGNIFFFGCSLQYHKYAHNYDNERKGMGKQLTLGLKSLFYSCSSIFNCYMNWICVGYSKIE* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00160 376 FunFam pto-interacting protein 1 153 304 - -
Pte15g00160 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Pte15g00160 376 Gene3D Transferase(Phosphotransferase) domain 1 152 328 - -
Pte15g00160 376 Gene3D Phosphorylase Kinase; domain 1 40 151 - -
Pte15g00160 376 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00160 376 ProSiteProfiles Protein kinase domain profile. 77 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00160 376 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Pte15g00160 376 SUPERFAMILY Protein kinase-like (PK-like) 57 305 IPR011009 -
Pte15g00160 376 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 11 301 - -
Pte15g00160 376 Pfam Protein tyrosine and serine/threonine kinase 81 286 IPR001245 GO:0004672|GO:0006468
Pte15g00160 376 FunFam PTI1-like tyrosine-protein kinase 3 41 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00160 Pte-Chr15 1162238 1165469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00160 57 302 Receptor kinase-like Gene Family AT4G02010 52.209 3.85e-77 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pte15g00160 PK_Tyr_Ser-Thr 8.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00160 K13436 - zju:107426175 518.464