Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00159 ATGGAGACTCGTGCAGCCAAGAGGAAGGCCGAGGCAGCAACTGCTGCTCTCTTGCCCCAGAATCAGCCTCCCAAGAAGAAGCGAGTCGTCTTGGGTGAGCTCCCCAATCTGTCGAACATAAACGTCCTCCATTCCGAAGTTTTAGCTTCTGGGTTGATTCGACACAGACCGAAATCTGAAGCCAAACCTAAGGCCAAGAAAGCAATAGGGAAATCCAAGCCACCGTTGGGTGCTGCTTATGCTTCAGATATTGAGGATTATCTTCGGCAACTGGAAATGGAGGTGAAGAGGAGACCTTTGTCAAATTACTTTGACAAAGTTCAGCAGGATGTTACTCCTAATATGAGGGGAATGCTGGTAGATTGGTTGGTGGAGGTTGCATTAGAGTACAGGCTTCTATCGGAGACCCTCTTTCTCTCGGTTTCCTACATCGACAGGTACTTGTCATTTAATGTTGTCCACAGGCAACTACTTCAATTGCTTGGTGTTTCTTCCATGCTTATTGCCTCTAAATACGAAGAAATCAAGCCTCCAAGTGTTGAAAAGTTCTGCGACATTACGGCTAACACTTACACCAAAGACCAGGTGGTAAAAATGGAGGCTGACATTCTGAGTTCGTTGAAGTTTGAATTGGGTACTCCCACCGTACTTTCATTTCTGCGAAGATTTTCTGGGGCTGCTCGTGACAGCCAAAAGGGTCTCAATTTGCAGTTTCTATTTCTGTGTGATTACCTCTCAGAATTGAGCTTGTTAGACTTTGCTTGTGTCAAATTTCTGCCTTCTCTTGTGGCTGCGTCTGTTCTATTTCTCGCAAGATTTACCTTGTGGCCCAAGAGAGAACCTTGGAATACAAAGCTAGGGGAACGCACAGGATATCAATCTGCGGACTTGAAGGAGTGTGTGCTTGTCTTGCATGATCTTTACTTGGGTAGAAGAGGAGGTTCGTTTCAAGCTATAAGAGACAAATACAAACAGCACAAGTCCAAATTCGTTGCACTTCTGCCCTCTCCTCCGGAGGTGCCCCTTTATTTCTTTGAAGATCAATGA 1047 0.4556 METRAAKRKAEAATAALLPQNQPPKKKRVVLGELPNLSNINVLHSEVLASGLIRHRPKSEAKPKAKKAIGKSKPPLGAAYASDIEDYLRQLEMEVKRRPLSNYFDKVQQDVTPNMRGMLVDWLVEVALEYRLLSETLFLSVSYIDRYLSFNVVHRQLLQLLGVSSMLIASKYEEIKPPSVEKFCDITANTYTKDQVVKMEADILSSLKFELGTPTVLSFLRRFSGAARDSQKGLNLQFLFLCDYLSELSLLDFACVKFLPSLVAASVLFLARFTLWPKREPWNTKLGERTGYQSADLKECVLVLHDLYLGRRGGSFQAIRDKYKQHKSKFVALLPSPPEVPLYFFEDQ* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00159 348 Gene3D - 97 212 - -
Pte15g00159 348 FunFam G2/mitotic-specific cyclin 99 212 - -
Pte15g00159 348 PANTHER CYCLINS 62 325 IPR039361 -
Pte15g00159 348 SMART cyclin_7 121 205 IPR013763 -
Pte15g00159 348 SMART cyclin_7 218 306 IPR013763 -
Pte15g00159 348 SUPERFAMILY Cyclin-like 214 339 IPR036915 -
Pte15g00159 348 MobiDBLite consensus disorder prediction 1 26 - -
Pte15g00159 348 ProSitePatterns Cyclins signature. 116 147 IPR006671 -
Pte15g00159 348 SMART Cyclin_C_2 214 337 IPR004367 -
Pte15g00159 348 Gene3D - 83 332 - -
Pte15g00159 348 Pfam Cyclin, N-terminal domain 86 211 IPR006671 -
Pte15g00159 348 Pfam Cyclin, C-terminal domain 214 336 IPR004367 -
Pte15g00159 348 PIRSF Cyclin_A_B_D_E 2 342 IPR046965 GO:0016538|GO:0044772
Pte15g00159 348 SUPERFAMILY Cyclin-like 74 211 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00159 Pte-Chr15 1159751 1160925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00159 1 347 Core Cell Cycle Gene Families AT1G47230 54.190 1.27e-129 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00159 K06627 - twl:120009204 403.29