Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00156 ATGGGGATAGAGAATAGTTTGGGCAGTGACACGGCGACAACCTCAGAGAGACAAGCGTTAGCCAGCATTGAAAATGAAAAGACAAACTCTGTTCCATTTCATAGGCTGTTCGCGTTTGCAGATTCTAATGATATTCTGTTGATGGTTGTGGGCAGCATCGGAGCCATTGGGAATGGTTTGGGTTTACCCCTCATGACACTTCTATTTGGTCGAATGATCAATTCTTTTGGAAGTAATCAGACCAACAGTGATATTGTCAAAGTGGTTTCCAAGGTGTCCCTGAACTTTGTCTATTTGGCAGTGGGAATTGGAGTAGCAGCATTCCTCCAGGTGACTTGCTGGATGGTCACAGGGGAGAGGCAGGCAGCAAGAATAAGAGGTTTGTATTTGAAAACTATACTGAGGCAAGATGTTGGTTTCTTTGACAAGGAAACAAATACTGGGGAGGTGGTTGGGAGAATGTCAGGAGATACTGTTTTGATACAAGATGCCATGGGCGAGAAGGTTGGGAAGTTTCTGCAGCTGATATCTACATTCTTTGGTGGCTTTGTCATAGCATTTGTCAAAGGGTGGCTTCTCACTCTTGTGTTACTGTCATCTCTTCCTCTTCTTGCAATCTCGGGTGCAACTATAGCTATAATCATAGGCAAAATGGCATCTCGTGGTCAAAATGCTTATGCAAAAGCTGCACATGTTGTCGAGCAGACAATAGGCTCAATCAGAACAGTCGCATCATTTACTGGAGAAGAGCAAGCGATATCTAATTACAGCAAGTATCTAGTGGATGCTTACAAATCAGGAGTTCGTGAAGGCTTTGCAGCTGGACTTGGTCTTGGCACGGTGATGTTTGTTGTTTTCTGCACCTACTCCTTGGCTGTATGGTTTGGAGCAATGATGGTACGAGAAAAGGGATATAATGGTGGTACGGTCATTAATGTGATCCTCGCTGTGTTAACTGCTTCTATGTCACTAGGTCAGGCATCTCCTTGCACGAGTGCCTTTGCTGCTGGTCAATCTGCAGCATACAAGATGTTTGAAACTATAAAGAGGAAGCCAGAGATAGATGCTTATGATACCAAGGGGAAAATATTAGACGATATCCATGGTGAGATAGAGTTAAAAGATGTCTATTTCAGCTATCCGGCCAGACCACTTGAGCAAATCTTTGATGGATTCTCTCTGCACATACTCAGTGGAACCACTGTAGCTTTAGTTGGACAAAGCGGAAGTGGAAAATCTACAGTAATTAGTCTGATTGAAAGATTTTATGATCCTCACTCTGGCGGAGTTCTTATCGATGGCATTAATCTCAAAGAATATCAGCTTAAATGGATGAGGGGCAAAATTGGCCTTGTCAGCCAGGAGCCAGTCTTATTTGCATCAAGCATTAGGGATAACATTGCCTACGGAAAAGATGGAGCTACTCTGGAAGACATAAGAGCAGCCACTGAGCTTGCAAATGCTTCCAAATTTATTGACAAACTGCCACAGGGATTAGACACAATGGTTGGTGAGCATGGAACTCAGTTGTCTGGAGGACAGAAGCAGCGGATTGCCATTGCTAGAGCGATTCTAAAAGACCCTAGAATTCTACTACTGGACGAAGCTACCAGTGCACTGGATGCGGAGTCTGAAAGGATAGTTCAAGAAGCATTGGACAGGATAATGGTCAATCGCACTACTGTTGTTGTGGCTCATCGTTTGAGTACAGTGAGCAATGCTGATATGATTGCTGTTATCCACAGAGGGAAGATGATTGAGAAAGGCTCACATGCAGAATTAGTCAAAGATCCTGAAGGTGCTTACTCTCAGCTCGTGCGCTTACAAGAAACAAATAACGAGGAGGAACATGCAAATGAACTGAACAAAGCTGAAAGTTCCATAGAATCATTTAGGCAATCAAGCCAAAGAATTTCACTGCAAAAATCCTTAAGTAGAGGATCATCGATAGGAAATAGCAGCAGCCATTCGTTTTCAGTTGCATTTGGGTTACCCACAGGTGTCCATGTCGCTGATCCTGAACTTGTAGCTCCCGAACTTGAAAAGGCTCCATCAGTTCCAATCCGCCGCCTTGCCTACTTGAACAAACCCGAGATTCCAGTTTTACTGATTGGATCAATTGCTGCTATCATTAACGGTGTCATACTTCCAATATTCGGCATACTTGTTTCCAAAGTAATCAAAACTTTCTATGAGCCACCTCATAAAATGAAAGAGGATGCTAAGTTTTGGGCATTGATGTTTATTGGCCTCGGTTTCATATCATTTCTGGTGATTCCTGCTCGAGGGTACTTCTTCTCTGTTGCAGGGTGTAAATTAATTCAGCGTATCAGATTGATGTGTTTTGAGAAGGTGGTCCGAATGGAGGTTGGTTGGTTTGATGATTCAGAGCACTCTAGTGGGGTAATTGGTGCTAGGCTTTCAGCTGATGCTGCAACTGTGCGAGCGCTTGTTGGTGATGCTCTCGGACTTACAGTCCAAAACATAGCAACGGCCCTTGCTGGTTTGGCTATAGCTTTCAATGCAAGTTGGGAGTTGGCGTTTATCATTCTTCTTTTGATTCCGCTTATTGTATTGAATGGATTTGTTCAAATGAAATTCATGAAAGGATTCAGTGCTGATGCTAAGATGATGTACGAGGAAGCAAGTCAAGTGGCTAATGATGCAGTTGGAAGTATTAGAACAGTTGCTTCATTCTGTGCTGAAGACAAGGTGATGGAACTCTACCAAAAGAAATGTGAAGGCCCCATGAAGTCAGGAATAAGACAAGGGTTGATCAGTGGAACTGGTTTTGGAGTATCATTCTTCTTGCTCTTTTGTGTATATGCAACCAGTTTCTACGCAGGAGCAAAGCTTGTTGACGCAGGAAAAACAACATTTCCTGACGTATTCCAGGTATTTTTCGCTTTGACAATGGCAGCTGTGGGAATGTCTCAAACTAGCACCTTCGGTCCCGATTCTAGTAAAGCCAAGTCAGCTACTGGTTCCATATTCGAAATAATAGATGGAAACTCAGAGATTGATCCTAGTGATGAGTCTGGGACAACGTTAGAGAATGTAAGGGGCGGTATTGAGCTTCGTCATGTAAGTTTCAAGTATCCGTCTAGACCAGACATCCAGATTCTCCGGGACCTGAGCCTGACAATTCATTCTAGCAAGACAGTGGCTTTTGTTGGAGAAAGTGGAAGTGGTAAATCCACAGTGATTGCTTTGTTACAAAGATTCTACGACCCTGATTCAGGTCATATTACTCTAGATGGAATTGAAATTCAGAAGTTCCAAGTGAAGTGGTTGAGGCAACAGATGGGTCTTGTTAGTCAAGAACCAGTTTTGTTTAATGATACCATCCGGGCAAACATTGCATATGGCAAGGGAGGCAATGCAACTGAGTCAGAGATTATAGCTGCAGCAGAGTCAGCAAATGCTCACAATTTCATCAGTAGCTTGCAACAGGGATATGAAACTGTAGTAGGAGCGCGTGGAATACAATTATCAGGTGGGCAGAAACAACGTGTAGCCATAGCACGTGCCATAATAAAAAGTCCAAAGATACTGCTCTTAGATGAAGCAACCAGTGCATTGGATGCAGAGTCAGAAAGGGTGGTTCAAGATGCATTAGATAGAGTCATGGTCAACCGGACAACAGTCGTGGTAGCTCATCGCTTGTCCACAATCAAGAACGCTGATTTGATTGCTGTGCTTAAAAATGGCGTCATAGTAGAAAAGGGAAAGCCGGAGAGCTTGATTCACATCAAGGATGGATTTTATGCTTCCTTGCTCGCACTTCATACAACCGCTTCAACTGTATAA 3810 0.4333 MGIENSLGSDTATTSERQALASIENEKTNSVPFHRLFAFADSNDILLMVVGSIGAIGNGLGLPLMTLLFGRMINSFGSNQTNSDIVKVVSKVSLNFVYLAVGIGVAAFLQVTCWMVTGERQAARIRGLYLKTILRQDVGFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLISTFFGGFVIAFVKGWLLTLVLLSSLPLLAISGATIAIIIGKMASRGQNAYAKAAHVVEQTIGSIRTVASFTGEEQAISNYSKYLVDAYKSGVREGFAAGLGLGTVMFVVFCTYSLAVWFGAMMVREKGYNGGTVINVILAVLTASMSLGQASPCTSAFAAGQSAAYKMFETIKRKPEIDAYDTKGKILDDIHGEIELKDVYFSYPARPLEQIFDGFSLHILSGTTVALVGQSGSGKSTVISLIERFYDPHSGGVLIDGINLKEYQLKWMRGKIGLVSQEPVLFASSIRDNIAYGKDGATLEDIRAATELANASKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVSNADMIAVIHRGKMIEKGSHAELVKDPEGAYSQLVRLQETNNEEEHANELNKAESSIESFRQSSQRISLQKSLSRGSSIGNSSSHSFSVAFGLPTGVHVADPELVAPELEKAPSVPIRRLAYLNKPEIPVLLIGSIAAIINGVILPIFGILVSKVIKTFYEPPHKMKEDAKFWALMFIGLGFISFLVIPARGYFFSVAGCKLIQRIRLMCFEKVVRMEVGWFDDSEHSSGVIGARLSADAATVRALVGDALGLTVQNIATALAGLAIAFNASWELAFIILLLIPLIVLNGFVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEDKVMELYQKKCEGPMKSGIRQGLISGTGFGVSFFLLFCVYATSFYAGAKLVDAGKTTFPDVFQVFFALTMAAVGMSQTSTFGPDSSKAKSATGSIFEIIDGNSEIDPSDESGTTLENVRGGIELRHVSFKYPSRPDIQILRDLSLTIHSSKTVAFVGESGSGKSTVIALLQRFYDPDSGHITLDGIEIQKFQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGNATESEIIAAAESANAHNFISSLQQGYETVVGARGIQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADLIAVLKNGVIVEKGKPESLIHIKDGFYASLLALHTTASTV* 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00156 1269 Gene3D ABC transporter type 1, transmembrane domain 682 990 IPR036640 GO:0005524|GO:0016020
Pte15g00156 1269 Gene3D ABC transporter type 1, transmembrane domain 35 636 IPR036640 GO:0005524|GO:0016020
Pte15g00156 1269 FunFam ABC transporter B family member 1 1014 1264 - -
Pte15g00156 1269 FunFam ABC transporter B family member 9 35 366 - -
Pte15g00156 1269 SUPERFAMILY ABC transporter transmembrane region 34 355 IPR036640 GO:0005524|GO:0016020
Pte15g00156 1269 ProSitePatterns ABC transporters family signature. 510 524 IPR017871 GO:0005524|GO:0016887
Pte15g00156 1269 SUPERFAMILY ABC transporter transmembrane region 684 1002 IPR036640 GO:0005524|GO:0016020
Pte15g00156 1269 Pfam ABC transporter transmembrane region 51 322 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte15g00156 1269 Pfam ABC transporter transmembrane region 702 974 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte15g00156 1269 Coils Coil 614 634 - -
Pte15g00156 1269 ProSitePatterns ABC transporters family signature. 1164 1178 IPR017871 GO:0005524|GO:0016887
Pte15g00156 1269 FunFam ABC transporter B family member 1 361 610 - -
Pte15g00156 1269 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 703 989 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte15g00156 1269 SMART AAA_5 1051 1244 IPR003593 GO:0016887
Pte15g00156 1269 SMART AAA_5 398 570 IPR003593 GO:0016887
Pte15g00156 1269 Pfam ABC transporter 390 538 IPR003439 GO:0005524
Pte15g00156 1269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1014 1260 IPR027417 -
Pte15g00156 1269 CDD ABC_MTABC3_MDL1_MDL2 1024 1259 - -
Pte15g00156 1269 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1024 1261 IPR003439 GO:0005524
Pte15g00156 1269 FunFam ABC transporter B family member 1 682 990 - -
Pte15g00156 1269 Pfam ABC transporter 1042 1192 IPR003439 GO:0005524
Pte15g00156 1269 PANTHER ABC TRANSPORTER B FAMILY 14 611 IPR039421 -
Pte15g00156 1269 CDD ABC_MTABC3_MDL1_MDL2 371 609 - -
Pte15g00156 1269 Gene3D ABC transporter type 1, transmembrane domain 991 1265 IPR036640 GO:0005524|GO:0016020
Pte15g00156 1269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 362 609 IPR027417 -
Pte15g00156 1269 CDD ABC_6TM_Pgp_ABCB1_D2_like 692 1007 - -
Pte15g00156 1269 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 49 336 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte15g00156 1269 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 371 607 IPR003439 GO:0005524
Pte15g00156 1269 CDD ABC_6TM_Pgp_ABCB1_D1_like 48 344 - -
Pte15g00156 1269 Gene3D - 1014 1264 IPR027417 -
Pte15g00156 1269 Gene3D - 361 610 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00156 Pte-Chr15 1148272 1153422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00156 31 1268 Calmodulin-binding Proteins AT2G36910 44.134 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00156 K05658 - qsa:O6P43_010926 1994.16