Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00150 ATGGGAAGGCACTCTTGCTGCTACAAGCAGAAACTAAGGAAAGGTCTCTGGTCACCTGAAGAGGATGAAAAGCTCTTGAAGCATATTACCAAGTATGGCCATGGATGCTGGAGCTCTGTTCCAAAGCAAGCTGGGTTGCTAAGGTGTGGTAAGAGCTGCAGATTAAGGTGGATCAACTACTTGAGGCCTGATTTGAAAAGAGGCACATTTTCACAAGAGGAAGAGAATACCATCATTGAACTTCATGCAGTCCTTGGGAACAGGTGGTCTCAAATAGCAGCACAATTGCCTGGGAGAACTGACAATGAAATCAAAAACTTGTGGAATTCGTGCTTGAAGAAGAAACTCAGGCAAAGTGGCATTGACCCTGTCACCCACAAACCACTCTCGGAGGTTGAAAATAGAGAGGACAAAGATATATCAGCGGCCAGAAGCCAGGGGAAAGTATCAGAAGAATCTAATGAACTAAACCTCCTTCAGGCAGTGAAATGTCAGTCAGAGATGACCGTACATGAACTGAGACCATCTTCAGTTCCCACACAAACCTACCGTTTTGAGGTACAAGGTTCTTCCTCCAGCTCCAGACCAATTAATGGCAGAAGCAGCAGTGCTTTGCTGCCCCACTGTTCAAGAAAAGAACTCTTAGAAAAGTTGTTCACATCACACCAAGGAAGCTCCACCACCAATTGCCAGCCCTTAGATATGGTAGGGCAACTTCCGCTTCACTTGAAATATTCAGCCACGTCCACTCTCTCAACAAATTCCAATCCTTGTCACTGGTTTGGCCAAACTGGAAAAACATTCAATATGAATTCTGAATTTACTTCCAATACAGTATCTACCATGGTTCCAACAACCTCAACCGACTCATTCCCGTCTAGTTCTGTTTGCTACAAGCCTTCATTGGCATTTCCCTCAGAAGACATCCCTATGACATCTTTCTCTATGAATGGATCTCGTTACTGGGGGGATTCAAGTAACTCCAACAATAATAGCACAAGCAGCAATAGAAGCAACAGCAGCACAGAGTTGCAGGGTAACGCCCCCTTCTTGGAGAACATGCTTCCATGGGAATTGACAGAATGCAGCATGTCTGACGAAGAAGCTCAGATTAATCTAATGGAAAACCAACCAGAAGTTGTCAAGTGGGTTGACTACCTTCACAATCCGATGATGCTAGGTGCTCTACAAATTCAAACTCCACCATCTCTATGTAACATGATAAAGCCAGACACACATTTTGTCTCTGATACTTTGGGGGCTATGTTGCCCCAGAATAAGCAGCAACAAGAATTTTTGCAGTCTTCTTCTCTTGACTCCAAGGATATTCAGAAGCTTACAGCAGCTTTTGGACATATTTAA 1362 0.4405 MGRHSCCYKQKLRKGLWSPEEDEKLLKHITKYGHGCWSSVPKQAGLLRCGKSCRLRWINYLRPDLKRGTFSQEEENTIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQSGIDPVTHKPLSEVENREDKDISAARSQGKVSEESNELNLLQAVKCQSEMTVHELRPSSVPTQTYRFEVQGSSSSSRPINGRSSSALLPHCSRKELLEKLFTSHQGSSTTNCQPLDMVGQLPLHLKYSATSTLSTNSNPCHWFGQTGKTFNMNSEFTSNTVSTMVPTTSTDSFPSSSVCYKPSLAFPSEDIPMTSFSMNGSRYWGDSSNSNNNSTSSNRSNSSTELQGNAPFLENMLPWELTECSMSDEEAQINLMENQPEVVKWVDYLHNPMMLGALQIQTPPSLCNMIKPDTHFVSDTLGAMLPQNKQQQEFLQSSSLDSKDIQKLTAAFGHI* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00150 453 Gene3D - 68 144 - -
Pte15g00150 453 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pte15g00150 453 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pte15g00150 453 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pte15g00150 453 PANTHER MYB DOMAIN PROTEIN 55 1 358 - -
Pte15g00150 453 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pte15g00150 453 FunFam MYB transcription factor 68 140 - -
Pte15g00150 453 CDD SANT 17 61 IPR001005 -
Pte15g00150 453 MobiDBLite consensus disorder prediction 324 345 - -
Pte15g00150 453 FunFam Myb transcription factor 11 67 - -
Pte15g00150 453 Gene3D - 11 67 - -
Pte15g00150 453 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Pte15g00150 453 MobiDBLite consensus disorder prediction 131 145 - -
Pte15g00150 453 SMART sant 66 114 IPR001005 -
Pte15g00150 453 SMART sant 13 63 IPR001005 -
Pte15g00150 453 CDD SANT 69 109 IPR001005 -
Pte15g00150 453 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pte15g00150 453 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pte15g00150 453 MobiDBLite consensus disorder prediction 131 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00150 Pte-Chr15 1101631 1103366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00150 1 146 MYB Transcription Factor Family AT4G01680 85.714 4.32e-89 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte15g00150 Myb_DNA-binding 2.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00150 K09422 - qsa:O6P43_007336 552.362