Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00149 ATGGCACTTCTTCCTTTGATTAAAGTCCCGATAACATTCTCCGCTCTGTTGATCTTGCTCTCTCCTTGTCAAGTGCTAACAGAACCCAACTGTGGCAGTAACAGAGCGTCGAGAAGACTCACAATGAAGCTGATTCTGTTGTTCTTATGCTACTGTGCTTTTCTACTAACTCTAATCACTGGGTTTGTTTATAGTGAATCTGAGACGCGGGGAGTGAGCAGTGCACTCTCGTACTTGGAGAACGATGTGTCTATGGCATCAGGTTCTAATTCCAAAGCTACAACTCCCTCTTCTATGCATCTCATGGTCGACCTCACCCTCATCCAGGGAGCAGCTTCCAAAGGAGCTGTCTGCTTAGATGGGACGCTGCCCGGTTACCATTTGCATCCGGGATACGGTTCAGGTGCAAACAGTTGGCTCATTCAGTTGGAGGGAGGCGGTTGGTGCAATTCCATCAAGAATTGTGTTTTCCGGAAAACTACTCGACGCGGTTCTTCAAAATATATGGAAAAGCAATTACCATTCACAGGAATACTAAGCAACAAAGCCGAAGAGAACCCTGATTTCTTCAACTGGAATAGAGTCAAGCTACGCTATTGTGATGGGGCATCTTTTGATGGAGACAGTGAGAATGAGACTGCAAAGCTTTATTTCCGGGGACAAAAGATTTGGTTGGCTGCCATGGAAGAACTCATGTCAAAGGGAATGAAGGATGCTGAGCAGGCTCTTCTTTCTGGCTGCTCTGCGGGCGGTCTTGCCTCCATATTACATTGTGATGAGTTCCGGGACTTGCTGCCAAAATCTACCAAAGTGAAATGTCTAAGTGATGGTGGATTTTTTCTTGACGCACCCGATGTATCTGGTGGGCGGACATTGAAGAATATGTATGATGGCGTGGTTAGATTACAGGAAGTACAGAAGAGCCTACCCCCTAGTTGTCTGGACCGCCTGGATCCAACATCATGCTTCTTTCCGCAGAATTTGATTGGGACCATTACAACTCCACTGTTTATTCTTAATGCTGCCTATGATGCATGGCAGCTTCAGGCAAGTTTGGTGCCACCTGCTGCTGATCCTCAAGGGTCTTGGAATGACTGCAAATCAAATCATGCCCTTTGTAATTCATCACAAATTCAGTTCCTTCAAGAGTTCAGGGATCAGATGCTCAACGCTGTAAAAGATTTCTCCAAGTCAAACCAAAATGGATTATTCATAAATTCCTGTTTTGCTCATTGCCAGTCAGAGAGACAGGATACGTGGTTTGCTGTTGATTCTCCTATGATAGGGAACCAGACAGCGGCAAAATCAGTTGGGAACTGGTATTTTGAACGTGAAGTTGTCAAAGCTATTGATTGTGAATACCCCTGTGACAACACCTGCCACAATCTGGTATACAAGTGA 1401 0.4532 MALLPLIKVPITFSALLILLSPCQVLTEPNCGSNRASRRLTMKLILLFLCYCAFLLTLITGFVYSESETRGVSSALSYLENDVSMASGSNSKATTPSSMHLMVDLTLIQGAASKGAVCLDGTLPGYHLHPGYGSGANSWLIQLEGGGWCNSIKNCVFRKTTRRGSSKYMEKQLPFTGILSNKAEENPDFFNWNRVKLRYCDGASFDGDSENETAKLYFRGQKIWLAAMEELMSKGMKDAEQALLSGCSAGGLASILHCDEFRDLLPKSTKVKCLSDGGFFLDAPDVSGGRTLKNMYDGVVRLQEVQKSLPPSCLDRLDPTSCFFPQNLIGTITTPLFILNAAYDAWQLQASLVPPAADPQGSWNDCKSNHALCNSSQIQFLQEFRDQMLNAVKDFSKSNQNGLFINSCFAHCQSERQDTWFAVDSPMIGNQTAAKSVGNWYFEREVVKAIDCEYPCDNTCHNLVYK* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00149 466 PANTHER NOTUM-RELATED 50 462 IPR004963 GO:0016787
Pte15g00149 466 SUPERFAMILY alpha/beta-Hydrolases 207 346 IPR029058 -
Pte15g00149 466 Pfam Pectinacetylesterase 99 446 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00149 Pte-Chr15 1081267 1085937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00149 42 467 Carbohydrate Esterase AT2G46930 65.023 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00149 K19882 - qsa:O6P43_007338 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01971 18 30251699 30255841 Pte15g00149 15 1081267 1085937 RCT
Pte18g01986 18 30358043 30361832 Pte15g00149 15 1081267 1085937 RCT
Pte15g00149 15 1081267 1085937 Pte18g01986 18 30358043 30361832 RCT
Pte15g00149 15 1081267 1085937 Pte18g01971 18 30251699 30255841 RCT
Pte15g00149 15 1081267 1085937 Pte15g00149 15 1081267 1085937 RCT
Pte3g00617 3 4848075 4852036 Pte15g00149 15 1081267 1085937 RCT