Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00148 ATGGGTAACGGCACTTCTCGTATTGTTGGTTGCTTCGCACCACCGAATGGGAAAAGTGGTGTTGATTTGGAGTTTTTAGAGCCATTGGATGAAGGATTAGGCCATTCCTTCTGTTATGTGAGGCCAGCATTTTTTGAATCACCTGCCATTACCCCATCAAACTCTGAGAGGTTTACAGTTGATTCAAGTACCATTGACTCTGAAACGTTAAGTGGATCTTTTAGGCATGAAGCCTTAGAGGATTCTTCTGGTGCACATAAAAGCAAGAATTTTCCAGAGACCACATTTAAGACCATATCAGGTGCTTCAGTAAGCGCCAATGTTTCTACTGCTAGGACTGGTAACCAGCTAGCATTATTTACAAGTGATTTCCAAGAACCTGCAGCATCTTTTGAGAACACCTCTTCGTTTGCTGCTATCCCGTTGCAGCCTATTCCCCGTGGCTGTGGGCCATTGAATGGATTCATGTCAGGGCCTCTTGAAAGAGGCTTCCAATCTGGTCCTTTGGATAGGAGTGAGGGTTTCATGTCCGGGCCGATAGAGAAGGGGATTATGTTAGGTCCTCTTGATTCTACCGATAAATCTAACTTCTCGGCACCTCTATCTCGTGGTCAATCAAGGCCAGGTCTTCAACACCTAATGAGGAGTGTGAGTGGACCTATGAAGAAAACTCTCTCTAAAACTTTCTCTAAACACTCAGTAGGCACTGGTTGGATGCAACGATTTTTGTTGCATCCAGTGACTCAGTCAGTCTGGCATCCTAAAGAGTCAAAACTTCCTGAAGCTTCTCAAAACTCTCCTGAAGTAGGTGGACCATCTGAAGGGGTGTACAAGCGTGCACACAATTTACAGTGGGCTCATGGAAAGGCTGGTGAGGACAGGGTCCACATTGTGCTCTCTGAAGAGCAAGGATGGTTGTTCATTGGGATATATGATGGTTTCAGCGGACCTGATGCACCTGATTTCCTGATGAGCTATCTTTATAGAGCTATAGATAAGGAGCTGGAAGGGTTGCTTTGGAATTCTGAAGAGTATTCTGTAGATGCACCGAGACATGAAATCCTTTCTGCAGGAAATGCTGTAACTAATCCAGAAAATTTGGGTTGTACAAGATGTCCAGGTACTGCAGAAATCACTGGAGGGCAATTCTCCAACAGGGAGATAGTTGAGGAAAGTATCAAAGATGGGAAGCATTTTGGGCCCAAACCTCCTACTGAAGAAGAAACAAACATCCCTGGTCCCACCGCTTCTCCTGTTCCAACTGGTAACCTGTCAGGTCAAGGAAGGAAAAGCATTCGCCTTTACCAGTTACTTCAGATAGAAGCCTTAGGTGAAATAGGGTGCAACAACGATGCTTCACTGGATTGCAATTCATTTTTGTGTTCTAAGGTTTCTGGGGAAAGTATACAAGAGGGACTGGCTATGTCTTCCAAATCAAACGCAGAAGTGGATAACATTAGCCATCAGGACCAACATCCCACAACATCTGGAGACAATGGAGATGTTAGATTTGAGTCTACTAGCAACATTTCCGCAAAGGATCCAGGTAGTTCAGATTCGAGGCACAATTCCAAGAAGTCATTAATTAGTTCAAAGATTAGAAAAATTTATTGGAAGCAGAAGTTCTTGCAGAAATTTCTTTTTCGTTGGAGTTATGATTGGCACAGAGAGAGGACCTGCATAAACCGTAGAATAGAGGAAACTTTGAGACCAATGAGAAGATGCAAGTCAGATGTTGTTGATCATGATGTTGTTTTAAGAGCAATGACTCGAGCACTTGAGAAGACAGAAGAGGCTTATGTGCAAATGGTGGAGAAGAATCTGGACAAAAACCCAGAGCTCGCTTTAATGGGATCATGTGTTCTAGTTATGTTAATGAAGGATGATGATGTGTATGTCATGAACCTTGGGGATAGTCGAGTGATCCTTGCACAAGAAAGACCAAATAATCGCCTTTCTAATATAACTTTTCCTAAGGATGATATGGGACATAGAAATAGGTCAAGAGACGCGTTAGTACGTATGGAACTGGATAGAATATCTGAGGATTCACCGTTTCATAATCAGAACAGTCAGTTAAACGATGCAAATAAATGCAAAGAGATATCACATTGTCGGTTAAAGATGAAGGCAGTTCAACTTTCCACCGATCACAGCACAAATATTGAACAGGAAGTTTCCAGAATAAGGGCAGAACACCCTGACGACAATCAAGCTGTATCAAATGATCGAGTGAAGGGGCAATTGAAAGTCAGCAGAGCTTTTGGAGCTGGTTTCCTGAAGAGGCCATCGTTCAATGAAGCTTTATTGGAGATTTTTCGGGTGAATTATGTGGGGTCTTCTCCATATCTAAGCTGCATACCTTCTACACTTCATCACCGATTATCGTCAACTGATCGTTTTTTGGTACTTTCCTCTGACGGTCTTTATCAATACTTCAATAATGAGGAGGTAGTTGCGCATGTTACATGGTTCATGGAAAATGTCCCTGAAGGTGATCCAGCTCAATACCTAATTGCGGAGCTTCTATTTCGTGCAGCCAAAAAGAACGGAATGGACTTTCATGAACTGCTTGGTATTCCTCACGGAGATAGACGTAAATACCATGATGATGTCTCTGTCATGGTTGTATCTTTGGAGGGAAGGATTTGGAAATCATCTGGGTAG 2667 0.4289 MGNGTSRIVGCFAPPNGKSGVDLEFLEPLDEGLGHSFCYVRPAFFESPAITPSNSERFTVDSSTIDSETLSGSFRHEALEDSSGAHKSKNFPETTFKTISGASVSANVSTARTGNQLALFTSDFQEPAASFENTSSFAAIPLQPIPRGCGPLNGFMSGPLERGFQSGPLDRSEGFMSGPIEKGIMLGPLDSTDKSNFSAPLSRGQSRPGLQHLMRSVSGPMKKTLSKTFSKHSVGTGWMQRFLLHPVTQSVWHPKESKLPEASQNSPEVGGPSEGVYKRAHNLQWAHGKAGEDRVHIVLSEEQGWLFIGIYDGFSGPDAPDFLMSYLYRAIDKELEGLLWNSEEYSVDAPRHEILSAGNAVTNPENLGCTRCPGTAEITGGQFSNREIVEESIKDGKHFGPKPPTEEETNIPGPTASPVPTGNLSGQGRKSIRLYQLLQIEALGEIGCNNDASLDCNSFLCSKVSGESIQEGLAMSSKSNAEVDNISHQDQHPTTSGDNGDVRFESTSNISAKDPGSSDSRHNSKKSLISSKIRKIYWKQKFLQKFLFRWSYDWHRERTCINRRIEETLRPMRRCKSDVVDHDVVLRAMTRALEKTEEAYVQMVEKNLDKNPELALMGSCVLVMLMKDDDVYVMNLGDSRVILAQERPNNRLSNITFPKDDMGHRNRSRDALVRMELDRISEDSPFHNQNSQLNDANKCKEISHCRLKMKAVQLSTDHSTNIEQEVSRIRAEHPDDNQAVSNDRVKGQLKVSRAFGAGFLKRPSFNEALLEIFRVNYVGSSPYLSCIPSTLHHRLSSTDRFLVLSSDGLYQYFNNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLGIPHGDRRKYHDDVSVMVVSLEGRIWKSSG* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00148 888 MobiDBLite consensus disorder prediction 395 426 - -
Pte15g00148 888 SUPERFAMILY PP2C-like 289 370 IPR036457 -
Pte15g00148 888 SUPERFAMILY PP2C-like 578 880 IPR036457 -
Pte15g00148 888 Gene3D - 255 375 IPR036457 -
Pte15g00148 888 MobiDBLite consensus disorder prediction 472 525 - -
Pte15g00148 888 Gene3D - 461 885 IPR036457 -
Pte15g00148 888 ProSiteProfiles PPM-type phosphatase domain profile. 276 879 IPR001932 -
Pte15g00148 888 SMART PP2C_4 263 877 IPR001932 -
Pte15g00148 888 MobiDBLite consensus disorder prediction 472 517 - -
Pte15g00148 888 PANTHER PROTEIN PHOSPHATASE 2C 278 878 IPR015655 GO:0004722|GO:0006470
Pte15g00148 888 Pfam Protein phosphatase 2C 705 850 IPR001932 -
Pte15g00148 888 Pfam Protein phosphatase 2C 592 654 IPR001932 -
Pte15g00148 888 Coils Coil 586 606 - -
Pte15g00148 888 CDD PP2Cc 585 879 IPR001932 -
Pte15g00148 888 MobiDBLite consensus disorder prediction 410 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00148 Pte-Chr15 1074227 1079772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00148 1 888 PP2C-type Phosphatase Gene Family AT2G46920 61.863 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00148 - - qsa:O6P43_010945 1263.06