Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00136 ATGGGAAGGCACTCTTGCTGCTACAAGCAGAAACTGAGGAAAGGCCTCTGGTCTCCTGAGGAAGACGAGAAGCTTTTGAATTACATTACAAAGCATGGCCATGGCTGTTGGAGCACTGTCCCAAAATTGGCAGGTTTGCAGAGATGCGGCAAGAGTTGCAGGTTGAGGTGGATAAATTACCTGAGGCCAGATTTGAAGAGGGGGGCATTTTCACAAGAGGAAGAGAACTTGATTATAGAACTCCATGCAGTTCTAGGCAACAGGTGGTCTCAGATTGCGGCTCAGTTGCCCGGAAGAACTGACAATGAAATAAAAAATCTATGGAATTCATGCCTTAAGAAGAAGCTTCGGCAAAGAGGAATTGACCCCAACACTCACAAGCTGCTGTCAGAAGTTGAAAATGACAATGATAAGCCGTCCTTAGCCACCAAAAGCAGTGACAAAACCTCGGAGGGATCGAATCATCTGAATGTTTCTGAACCTGCAAAGCAAAAACCACATTCAGTGATTGGAGAGAGATACTCACAGCTTGAACGGTCTTGCGCCTCCAAAATCAACAATGGCAGCAGTAGCTTTCATGATAATTTGACAAGTACACCACCACCTACACAGGACCTATTCCCATATAGGTTCAACACCTGCTTTGATAACTCCCCAACCAGTTGCAGACCTTCTGATATGGTGGGGTATTTCTCTTTCCAGCAGATGAATTATGGTCCCAACATGGGTCTCTCAGCAAATCCAAACAACTCTCTCTGTTTTCTTCCAAATTCGACCAGTTCTGAGGTAATAATATCCGAGAGCATGATGGGTTCCTCGTCAAATTCAATTTTCCCAGCACCGACACAAGTGAAGCCTACCGTTAGTCTTCCATCTACTAATCCTTCCATAGCCTCTGGCAATGTCAGTGGTGTTCGGAACTGGGAAGCGGCCGGCAGTTCATTAAGCAGCAATAGCAATGGAAGCTGTAGCGGTGTCCAATTGCAGAGCGGCAGTAGCTTCTTTGAGAACAACACGTTCTCGTGGGGACTAGCAGATTCTGTGAAATCTGGCAAACAAGGCCATATTCATTCCTTACAAGGAGAGGTGGGGGACATCAAATGGTCTGAATATCTCAGTAACCCTTTCTTCCTTGGAGCAAATTCAAATGGTCAGAATCAAACCACTCAGTCTATCTACAGTGACGTAAAACCTGAATCAGTGTTCATCACCGAAGACTCAAATAGTAGCTGGCATCACAGCCAAACCCCAACTAGCCTCCAAGCTTCAGATACATATACAAAGGACCTGCAGAGACTTGCTGTTGCTTTTGGACAAGGCCTTTAG 1326 0.4563 MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSTVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPNTHKLLSEVENDNDKPSLATKSSDKTSEGSNHLNVSEPAKQKPHSVIGERYSQLERSCASKINNGSSSFHDNLTSTPPPTQDLFPYRFNTCFDNSPTSCRPSDMVGYFSFQQMNYGPNMGLSANPNNSLCFLPNSTSSEVIISESMMGSSSNSIFPAPTQVKPTVSLPSTNPSIASGNVSGVRNWEAAGSSLSSNSNGSCSGVQLQSGSSFFENNTFSWGLADSVKSGKQGHIHSLQGEVGDIKWSEYLSNPFFLGANSNGQNQTTQSIYSDVKPESVFITEDSNSSWHHSQTPTSLQASDTYTKDLQRLAVAFGQGL* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00136 441 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pte15g00136 441 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pte15g00136 441 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pte15g00136 441 SMART sant 13 63 IPR001005 -
Pte15g00136 441 SMART sant 66 114 IPR001005 -
Pte15g00136 441 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pte15g00136 441 MobiDBLite consensus disorder prediction 123 170 - -
Pte15g00136 441 CDD SANT 17 61 IPR001005 -
Pte15g00136 441 FunFam MYB transcription factor 68 140 - -
Pte15g00136 441 MobiDBLite consensus disorder prediction 145 161 - -
Pte15g00136 441 Gene3D - 68 151 - -
Pte15g00136 441 Gene3D - 11 67 - -
Pte15g00136 441 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Pte15g00136 441 FunFam Myb transcription factor 11 67 - -
Pte15g00136 441 CDD SANT 69 109 IPR001005 -
Pte15g00136 441 PANTHER MYB DOMAIN PROTEIN 55 1 338 - -
Pte15g00136 441 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pte15g00136 441 MobiDBLite consensus disorder prediction 123 144 - -
Pte15g00136 441 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00136 Pte-Chr15 1014830 1016687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00136 1 442 MYB Transcription Factor Family AT1G09540 46.239 6.15e-118 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte15g00136 Myb_DNA-binding 3.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00136 K09422 - qsa:O6P43_007365 589.341