Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00135 ATGCCTCTTTATGAGTTAAATCGAAGGGGTATTGTTTCTCAGGATTCGGACCCTCCATGTTCTAGTGGGCAATCACCCGTACGACAGAATGATTTGTTCGAACTTGTGTGTGAAAATGGTCAGATTTTGATGCAAGGTCATTCTAATGCACCTAAGAGAACTGCGGCTTGTAAGAGCTTACCATCCCAATGTTTGCTTCCCAGGGGTAGAGATACGCTCATAGGAAATAGTAGCGTTGCAAGGATTGGAAAGTTTGGAGAATTGGATTCTGTAATTAATGAAATCCCAATGTCGGTGCATTCTAGTGAGATTGGGTTGAATCAGGATGAAGAAATGGCACCTTGGGTGAATTACGCTATAGAGAACCCATTACAACATGATTATAGTACTGATTTGTTGGCTGAATTATCAGGTGTCACGGCATATGAGCTTCCCAACGTTGACAGTTCGTCAGTAATGGATAAAAGAAGCAGCTATAACCATTCGAGCCGCAATTTGCATAAAGTTTCTGTCCTTGGTAGTGCAAGTTCAGAACAAGGAAATGTCTCCAAAGTTTCTTCTACTGGGGAAGGTGGGGTTACTATACTTGGTACGAGCTCAAGTAGGTTATATAAACCGTTTTCAGAACAATGCCAGACATCTCTTGCTTTTCTCAAAACAAAAGAATTCGATACTCACAACAAGAGAAGTAATGGTAGCAACCGTCTATTTTCTGATTGTGTGACTCCGGTTACATGTACGACTGGTTTTTCTGACCTTAAAGTGTTGAAGCAAGATTCAGTGTTACCTAGCAGTGGCTCTACCACGATGAATTTCTCTCATTTTGCACGATCTGCTGCTCTAATGAGAGCTAATGCTCAGAGTATTGGTGCAATGTGTGGATTGCCTTCTGCAAAGACTGACAGTGTGTCAAATGGAGAAAGGGAATTTACCCCAAGTAGCAATAATTCTCCTAAATCAACTCCTACTAATTTAAGTAATGGTTATGCAAAAGAATCAATAGAGCTGGGTAAGCAGGGTATGCTGCATTCTAAAATTGATTCTCCACCATTGCATTCAAAACCTTACCAAGAGCATACTGCTGCTGCCAAACCATCTGAGCCTGTATATAAAGCTGATGCCCCAACATATGAAAATAACTCGTGTCAAATCCCTGTTGAAGACACGGCTAAAGGATTGACAGATGGTGAGAAGAGTATGGAGCCTGTAGTGGCGTCTTCAGTCTGTTCAGGCAATAGCGTGGAGAAGGCTTCTGATGAACCAATTCCAAACAAAAGGCGTAAAACTCTTGACACTGAAGAATCTGAATGCCATAGTGAAGACATCGAAGAAGAATCTGTAGGCGTGAGAAAATCAACTAATGCTCGAGGAGGTGCAGGTTCCAAGAGAAGTCGAGCAGCAGAAGTTCATAATCTATCTGAGAGGAGAAGAAGAGATAGGATCAATGAGAAGATGCGTGCGCTGCAAGAGCTCATACCAAACTGCAATAAGGTGGACAAAGCTTCCATGCTTGATGAAGCTATTGAGTATCTTAAAACACTTCAACTCCAAGTACAGATGATGTCAATGGGATCCGGCTTTTACATGCAACCGATGATGTTACCGACTGCAATGCAACACATGCATACTCCAGTAATGCCTTCCTTTTCACCAATGAGTGTTGGGATGCATATGGGATTTAGAATGGGTTATGGCATCGGCATGTCCGACATAAACGCAACATCGTCTTCCTATCCAATGATGCAGATGCCTTCAGTGCAAGGAACTCATTTTCCCACCACACCTACATCAGGACAAATTGGTTTGAATGGGATGGCTGGGTCGACTCTTCAAGTGTTTGGGCTCCCTGGTCATGGACTTCCTTTTTCAATGTCACATGCACCCTTATTTTCAGGAGCTCCAATAATGAAACCCAATACCTGCGAATCAAACTGTCTGGTGGACAATTTGGATTCAGCTTCAGCGTCCGGAACAAAAGATCAAACTGAAAATAGGACCACAGAGATTACACACAACCCTTTTGGCAACGACGTAATCAATCAAATGTCTAATCAGGCTGCACCTCCTGGATGTGATCACCCAGCTTTAGTCGAAGAGCATTGCCATGCTGGCAGAGGAACGGGTGATTCTGGAAAAGAAGACCAAACTCAGCCTATACGTCTGAACTGA 2169 0.4292 MPLYELNRRGIVSQDSDPPCSSGQSPVRQNDLFELVCENGQILMQGHSNAPKRTAACKSLPSQCLLPRGRDTLIGNSSVARIGKFGELDSVINEIPMSVHSSEIGLNQDEEMAPWVNYAIENPLQHDYSTDLLAELSGVTAYELPNVDSSSVMDKRSSYNHSSRNLHKVSVLGSASSEQGNVSKVSSTGEGGVTILGTSSSRLYKPFSEQCQTSLAFLKTKEFDTHNKRSNGSNRLFSDCVTPVTCTTGFSDLKVLKQDSVLPSSGSTTMNFSHFARSAALMRANAQSIGAMCGLPSAKTDSVSNGEREFTPSSNNSPKSTPTNLSNGYAKESIELGKQGMLHSKIDSPPLHSKPYQEHTAAAKPSEPVYKADAPTYENNSCQIPVEDTAKGLTDGEKSMEPVVASSVCSGNSVEKASDEPIPNKRRKTLDTEESECHSEDIEEESVGVRKSTNARGGAGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGSGFYMQPMMLPTAMQHMHTPVMPSFSPMSVGMHMGFRMGYGIGMSDINATSSSYPMMQMPSVQGTHFPTTPTSGQIGLNGMAGSTLQVFGLPGHGLPFSMSHAPLFSGAPIMKPNTCESNCLVDNLDSASASGTKDQTENRTTEITHNPFGNDVINQMSNQAAPPGCDHPALVEEHCHAGRGTGDSGKEDQTQPIRLN* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00135 722 SMART finulus 471 520 IPR011598 GO:0046983
Pte15g00135 722 MobiDBLite consensus disorder prediction 653 687 - -
Pte15g00135 722 MobiDBLite consensus disorder prediction 419 435 - -
Pte15g00135 722 MobiDBLite consensus disorder prediction 653 722 - -
Pte15g00135 722 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 465 514 IPR011598 GO:0046983
Pte15g00135 722 Pfam Helix-loop-helix DNA-binding domain 469 515 IPR011598 GO:0046983
Pte15g00135 722 MobiDBLite consensus disorder prediction 695 709 - -
Pte15g00135 722 CDD bHLH_AtPIF_like 465 527 IPR047265 -
Pte15g00135 722 MobiDBLite consensus disorder prediction 1 26 - -
Pte15g00135 722 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 462 528 IPR036638 GO:0046983
Pte15g00135 722 MobiDBLite consensus disorder prediction 343 380 - -
Pte15g00135 722 MobiDBLite consensus disorder prediction 407 474 - -
Pte15g00135 722 FunFam Basic helix-loop-helix transcription factor 460 523 - -
Pte15g00135 722 Gene3D - 460 523 IPR036638 GO:0046983
Pte15g00135 722 MobiDBLite consensus disorder prediction 298 327 - -
Pte15g00135 722 PANTHER TRANSCRIPTION FACTOR PIF3 1 682 IPR044273 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00135 Pte-Chr15 1005779 1009767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00135 356 540 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 56.021 1.91e-52 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte15g00135 HLH 7.9e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00135 K12126 - qsa:O6P43_007367 647.891