Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00133 ATGGACTCCAGGTGGTACGACGGAAGGCATGAACAAAGTAGCAGTGATAAGCGGTTACATGAAAGTGATCAGGATTTTCTTATTGACGAGATGGCAGGCGATTTTCGCTTGCCCATCAACCATAGACCCACAGAAAATGTTGATCTGGACAACGTGGAACAAGCATCCTTAGACACACAAATAACGTCATCCAACGTTGGTTTTAGGCTTCTCCAAAAGATGGGCTGGAAGGGAAAAGGTCTCGGGAAAGATGAGCAAGGAATTATTGAACCGATAAAATCAGGAATCAGGGATCCCAAATTAGGGATTGGGAAACAAGAGGAAGATGATTTTTTCACTGCTGAAGAAAATATACAAAGAAAAAAGCTTGATGTAGAGGTGGAGGAGACTGAGGAGCTTGCTAAGAAGCGGGAGGTCTTGGCAGAACGTGAGCAGAAAATTCAAACTGAGGTGAAAGAAATACGAAAGGTGTTTTATTGCGACCTCTGCAACAAACAATACAAATTGGCAATGGAGTTTGAAGCTCACCTTAGCTCGTATGACCATAATCACAGAAAGCGTTTTAAAGATATGAAGGAAATGCACGGAACCAGTGGTCGGGATGATCGGCAGAAACGGGAACAGCAACGCCAAGAAAAAGAGTTGGCCAAATTTGCTCAAATGGCTGATGCCCGAAAGCAGCAGCACATGCAACAAAAACAGGATGAGTCTGCAGGCGCTTCAGTTTCCTCTGAATCTAAAGGTGCTACAGCCCTTGCATATCAGGAGCAGCGCACTGCTTTGAAGTTTGGATTTTCTTCGAAAGGCAGCAAAACCAAGACCTTGCTTAGTGGTGCCGCAAAGAAACCGAAAGTGACAGTTGCCTCTGTCTTCGGAGATGGAAGCGATGAAGAGTAG 897 0.4482 MDSRWYDGRHEQSSSDKRLHESDQDFLIDEMAGDFRLPINHRPTENVDLDNVEQASLDTQITSSNVGFRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRKKLDVEVEETEELAKKREVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKDMKEMHGTSGRDDRQKREQQRQEKELAKFAQMADARKQQHMQQKQDESAGASVSSESKGATALAYQEQRTALKFGFSSKGSKTKTLLSGAAKKPKVTVASVFGDGSDEE* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00133 298 SMART G-patch_5 61 106 IPR000467 GO:0003676
Pte15g00133 298 MobiDBLite consensus disorder prediction 233 251 - -
Pte15g00133 298 MobiDBLite consensus disorder prediction 193 220 - -
Pte15g00133 298 Pfam G-patch domain 64 104 IPR000467 GO:0003676
Pte15g00133 298 ProSiteProfiles G-patch domain profile. 63 108 IPR000467 GO:0003676
Pte15g00133 298 MobiDBLite consensus disorder prediction 268 298 - -
Pte15g00133 298 SUPERFAMILY beta-beta-alpha zinc fingers 156 188 IPR036236 -
Pte15g00133 298 MobiDBLite consensus disorder prediction 1 23 - -
Pte15g00133 298 Pfam Zinc-finger double-stranded RNA-binding 158 185 IPR022755 -
Pte15g00133 298 ProSitePatterns Zinc finger C2H2 type domain signature. 160 182 IPR013087 -
Pte15g00133 298 MobiDBLite consensus disorder prediction 193 251 - -
Pte15g00133 298 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00133 Pte-Chr15 993414 996534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00133 1 299 C2H2 Transcription Factor Family AT5G26610 67.541 2.67e-129 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00133 - - jre:108987907 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00133 15 993414 996534 Pte15g00133 15 993414 996534 RCT