Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00130 ATGTACGGCGACGGGCCTAACAATACCATTGTGGCTGGATATTTTGACGAGAATTTTGTAATGACTGCTTTCATGGGGTCTACGCTTGGTCAGTTTCCACTTTCCCATTGCCTGGGTGTGACTGCGAAATTCTACAGAGACTGCGAAATTCTTGGGGGTGGAACTGTCCTCAAGGGTGACGGTGCAACAGTAATACAGAACTCTCGAATCCTTTTGAATCCTACCAAAACCACGAATATAGTAAGTGAACAATTGAGGTCAGATAAGAATGAGAACACAGGGTTTGTGATCCATAACTGCAGCATAGGCATCAATAGCGAGTACGACAAAAAACGGAGCATAAAGACTTATAAGAATCCCCTGCATGCGAGTTGTCTAGGTAGACCAGGTAAAGAATTCTCAAGAACAGTTATAATGGAATCTTATCTACCAGATATTATAAAGCCACAGGGATGGTGTCAGTTAAGGGATGACTATGGGGTTGGAGCTAAGACTGATAAGAGGGTAAACTGGTCCAGTTTTGGGATTATCAAAGATGTAGAAGAAGCTCGAAAGTATACAGCTGGTCAGTTCATCCAAGCTGATAGCTGGCTCAAGAGCTCAGGCATACCATACTATTCGGGGCTTGTATCAGATGGGAGTAGTGCTTGA 651 0.4363 MYGDGPNNTIVAGYFDENFVMTAFMGSTLGQFPLSHCLGVTAKFYRDCEILGGGTVLKGDGATVIQNSRILLNPTKTTNIVSEQLRSDKNENTGFVIHNCSIGINSEYDKKRSIKTYKNPLHASCLGRPGKEFSRTVIMESYLPDIIKPQGWCQLRDDYGVGAKTDKRVNWSSFGIIKDVEEARKYTAGQFIQADSWLKSSGIPYYSGLVSDGSSA* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00130 216 SUPERFAMILY Pectin lyase-like 2 208 IPR011050 -
Pte15g00130 216 PANTHER PECTINESTERASE 43 199 - -
Pte15g00130 216 Pfam Pectinesterase 43 195 IPR000070 GO:0030599|GO:0042545
Pte15g00130 216 Gene3D - 7 211 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00130 Pte-Chr15 983795 984562 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00130 43 209 Carbohydrate Esterase AT3G14310 38.798 6.94e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00130 K01051 - gmx:102665007 166.392