Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00129 ATGGTGAAGAACACCGCATATCTTGCTTTTGCTTTTGCTGTCTTGTTCGGTATCATGACTGTAAAGACGATAGTGGAATATTCAGAGGAAGAAGACGAGAAGAAAAGGAGGCAATTGATTACCAACATAATTCTTCTGGCTGTCTCTGTATTGATGATTGGAGCAGTGACCGTTGCTGTTGAGACAGGATTGCTTGGTAGGGGCGACAATGGCCAAGGTTCAACTCGTGCTGTTCAATCAGTGTGCAAGGGTACCGATTTTCCTGATCTATGTTATCAGAAACTTAAGTACGTAGGCCTAAGAGCCCCACCTATAAAGTACGTGAAAGCTGGTCTAGATAAAACTTTGGAAGAATTGCGACCGGCATTGGAAATTGAACATAAAGATCTTGATTACTTGCGTCTAGATCAGATTAATGTCGTCGGCGATTGCGTACAGCTGCTCAGTACAGCCACGGAAGGACTCCGAGATATGATCCAGTGGGTAGAGTCTGACAAGAAATTCTTGGAGTCAAATCCTGAGGAGCTCAGGACAGGCTTGAGTGCAGTCATCACGTCCACACTAACTTGTCTTGATGAATTAAAGTTGACGAATAGCACCAGTGTCTTTGACAATGGGAACTCCATAAGAAGTCCCATGCAGATGGCAAGGATTACCTTGGCCATTGTCTTCCAAAATTCTGATAACAGTGACGAAGAGACATATCCACATCAACGACCAAGTAACCGAAGATCCTTAATCACTAGATACAGCATTGGCGTTTATGATAATGCTAATGCTTTCCCAAAATGGATGACAGCAGCGGATAGAAAACTCTTGGAAGTTCATGAAAATGGCAATCTCAAGCCTGATGTTATAGTGGCCAAAGATGGAAGTGGACAATATACTAGTATAGCGGATGCAATTGACGAATACCCATTGGAACGCAATACTCGGTCTGTCATCTATGTCCGCGAGGGAATATACTCAGAGAGAGTATTCATTGACAGCAGCGTCACCCAAATATTTATGTACGGCGACGGGCCTAACAATACCATTGTGGCTGGATATTTTGACGAGAATTTTGTAATGACTGCTTTCATGGGGTCTACGCTTGTTGTCTTTGGCCATGGCTTCCTCTGCAAGGATGTGACTATCGCTGCCGTGGATGGCCCTTTTGAATATGAATACGAACCACATGTTCGTGTCTATGCTGATAAATCAGCATTCTTCAATTGCGTCATAAGAGGTGAGAGAGGTGGCTTATTTGCTGGATCTCATCGTCAATTCTACAGAGACTGCGAAATTCTTGGGGGTGGAACTGTCCTCAAGGGTGACGGTGCAACAGTAATACAGAACTCTCGAATCCTTTTGAATCCTACCAAAACCACGAATATAGTAAGTGAACAATTGAGGTCAGATAAGAATGAGAACACAGGGTTTGTGATCCATAACTGCAGCATAGGCATCAATAGCGAGTACGACAAAAAACGGAGCATAAAGACTTATAAGAATCCCCTGCATGCGAGTTGTCTAGGTAGACCAGGTAAAGAATTCTCAAGAACAGTTATAATGGAATCTTATCTACCAGATATTATAAAGTCACAGGGATGGTGTCAATTAAGGGATGACTATGGGGTTGGAGCTAAGACTGATAAGAGGGTAAACTGGTCCAGTTTTGGGATTATCAAAGATGTAGAAGAAGCTCGAAAGTATACAGCTGGTCAGTTCATCCAAGCTGATAGTTGGCTCAAGAGCTCAGGCATACCATACTACTCGGGGCTTATATCAGATGGGAGTAGTGCTTGA 1788 0.4323 MVKNTAYLAFAFAVLFGIMTVKTIVEYSEEEDEKKRRQLITNIILLAVSVLMIGAVTVAVETGLLGRGDNGQGSTRAVQSVCKGTDFPDLCYQKLKYVGLRAPPIKYVKAGLDKTLEELRPALEIEHKDLDYLRLDQINVVGDCVQLLSTATEGLRDMIQWVESDKKFLESNPEELRTGLSAVITSTLTCLDELKLTNSTSVFDNGNSIRSPMQMARITLAIVFQNSDNSDEETYPHQRPSNRRSLITRYSIGVYDNANAFPKWMTAADRKLLEVHENGNLKPDVIVAKDGSGQYTSIADAIDEYPLERNTRSVIYVREGIYSERVFIDSSVTQIFMYGDGPNNTIVAGYFDENFVMTAFMGSTLVVFGHGFLCKDVTIAAVDGPFEYEYEPHVRVYADKSAFFNCVIRGERGGLFAGSHRQFYRDCEILGGGTVLKGDGATVIQNSRILLNPTKTTNIVSEQLRSDKNENTGFVIHNCSIGINSEYDKKRSIKTYKNPLHASCLGRPGKEFSRTVIMESYLPDIIKSQGWCQLRDDYGVGAKTDKRVNWSSFGIIKDVEEARKYTAGQFIQADSWLKSSGIPYYSGLISDGSSA* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00129 595 Pfam Pectinesterase 284 574 IPR000070 GO:0030599|GO:0042545
Pte15g00129 595 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 222 IPR035513 -
Pte15g00129 595 CDD PMEI-like_3 80 223 - -
Pte15g00129 595 Gene3D - 281 590 IPR012334 -
Pte15g00129 595 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 225 IPR035513 -
Pte15g00129 595 PANTHER PECTINESTERASE 48 578 - -
Pte15g00129 595 SMART PMEI_2 73 222 IPR006501 GO:0004857
Pte15g00129 595 SUPERFAMILY Pectin lyase-like 282 587 IPR011050 -
Pte15g00129 595 Pfam Plant invertase/pectin methylesterase inhibitor 77 221 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00129 Pte-Chr15 980954 983028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00129 25 595 Carbohydrate Esterase AT3G05610 29.402 5.06e-81 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00129 K01051 - gmx:102665007 359.377