Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00127 ATGACATCAGTAGGTGTGGCACCAAATGTGGGCTTTAGAGAAACCACTTCTCATTCAGCAGGTGTTGATGGACTCCCGGAGGAGATGACTGGTTTGAAAATTAGAGATGACAAAGAAATGGAGGAAACAGTTGTTGATGGTAATGGGACAGAGACAGGTCACATAATTGTGACTACTATAAATAGTAGAAATGGTCAATCAAAGCAGACTATTAGCTATATGGCAGAGCGTGTTGTTGGACATGGATCCTTTGGAGTCGTTTTCCAGGCTAAATGTCTTGAGACTGGTGAAACCGTGGCAATTAAAAAGGTTCTTCAAGACAAGAGATACAAGAACCGGGAGCTTCAGACAATGCGCCTTCTTGATCATCCAAATGTTGTCTCTCTGAAGCATTGTTTCTTTTCCACAACCAACAAGGATGAGCTATATCTTAATTTAGTGCTTGAGTACGTTCCTGAAACTGTTCATCGTGTGATCAAACACTACAACAAGTTGAATCAAAGGATGCCATTGATATATGTTAAACTCTATTCATATCAGATATTTAGAGCTCTTTCTTATATTCATAGGAGCATTGGAGTTTGTCATCGGGATATCAAACCTCAAAATCTGTTGGTTAATCCACATACTCACCAGGTTAAACTGTGTGACTTTGGAAGTGCAAAAGTCTTGGTAAAAGGAGAACCAAATATATCTTACATATGCTCTAGGTATTATAGAGCTCCTGAACTTATATTTGGGGCAACTGAATATACCACAGCTATTGACATCTGGTCAGCTGGATGTGTATTGGCAGAGTTGATGCTGGGTCAGCCTCTGTTCCCCGGTGAGAGCGGCGTTGATCAGCTTGTTGAGATCATAAAGGTACTGGGAACCCCAACAAGGGAGGAGATCAAATGCATGAATCCTAACTACACAGAATTTAAGTTCCCACAAATTAAAGCTCATCCGTGGCACAAGATTTTAAACAAACGGATGCCCCCAGAAGCTGTCGACCTGGTTTCAAGACTATTACAATATTCCCCAAACCTACGCTGCTCAGCTCTATATACCTTGACTCATCCTTTCTTCGATGAGCTTCGGGACTCAAACATCCGTCTACCAAATGGGCGTTTCCTTCCACCATTATTCAACTTCAAGTCCCATGAGCATGCTAGGAAACAATGCCCCTCTCTTGCATTGTGA 1185 0.4177 MTSVGVAPNVGFRETTSHSAGVDGLPEEMTGLKIRDDKEMEETVVDGNGTETGHIIVTTINSRNGQSKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTNKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLIYVKLYSYQIFRALSYIHRSIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLAELMLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKILNKRMPPEAVDLVSRLLQYSPNLRCSALYTLTHPFFDELRDSNIRLPNGRFLPPLFNFKSHEHARKQCPSLAL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00127 394 Gene3D Phosphorylase Kinase; domain 1 57 152 - -
Pte15g00127 394 SUPERFAMILY Protein kinase-like (PK-like) 72 383 IPR011009 -
Pte15g00127 394 Gene3D Transferase(Phosphotransferase) domain 1 153 391 - -
Pte15g00127 394 ProSitePatterns Protein kinases ATP-binding region signature. 79 103 IPR017441 GO:0005524
Pte15g00127 394 ProSiteProfiles Protein kinase domain profile. 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00127 394 CDD STKc_GSK3 68 360 IPR039192 -
Pte15g00127 394 MobiDBLite consensus disorder prediction 1 16 - -
Pte15g00127 394 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 38 384 - -
Pte15g00127 394 SMART serkin_6 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00127 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Pte15g00127 394 FunFam Glycogen synthase kinase-3 beta 57 152 - -
Pte15g00127 394 Pfam Protein kinase domain 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00127 394 FunFam Shaggy-related protein kinase kappa 153 392 - -
Pte15g00127 394 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00127 Pte-Chr15 968180 973022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00127 77 362 MAP Kinase Gene Family AT3G59790 34.694 4.79e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pte15g00127 Pkinase 1.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00127 K27413 - qsa:O6P43_010999 738.799