Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00119 ATGGCGTCTCTAATTTCACTAGAACCCATCGATTTTCATAATCACAGCGATAGCTACGATAATTCTGTTGCTTTGTCCACTGCCGTGGATGAATCAAATCCCAGGAAACGCAGGAAAACTGGCGACCCTATCATTCATCCACACCGAAATCAAACTCATACTTCTCCTATCCAATGGAGATCCCATACCCAGCAGACTATCTATTCCACCAAGCTAATCCAAGCTCTTCGCCAAGTTCTTTGTCGGACCACCACCCACCGCAACGCCGATCGTGATGTCCGCGACGCCGCCAACAGAATTCTTGCCACCACCGCTAAGGGGAGGACACGGTGGAGTCGGGCGATTCTCGCGAGCCCACTCGGCGGGTCTAGGTTTCAAAAGGCAAACAAGCATAAGAAGGTCAAGAAAGTGACTGGATATGGAATGTGGAAGAAGAAGAGAACTAATTTATCGGAAGGGATGAGGAGGATGAGGGTAAAGGACATGAGTCGGAGAAAGTCGCCGGCCGTGCATTTACAGAGAAAACTCCGCGTTCTCGGGACATTGGTTCCCGGTTGCCGAAAAGTCTCGCTTCCTAATCTCTTAGAAGAAGCCACCGACTACGTCTCAGCTTTGGAGATGCAAGTTCAAGCTATGAAGGTGATCACAGAGTTACTCGCCGGTGGTACGGCGGCCGATCGGGTAAACCCACCTCTATCATGA 702 0.5028 MASLISLEPIDFHNHSDSYDNSVALSTAVDESNPRKRRKTGDPIIHPHRNQTHTSPIQWRSHTQQTIYSTKLIQALRQVLCRTTTHRNADRDVRDAANRILATTAKGRTRWSRAILASPLGGSRFQKANKHKKVKKVTGYGMWKKKRTNLSEGMRRMRVKDMSRRKSPAVHLQRKLRVLGTLVPGCRKVSLPNLLEEATDYVSALEMQVQAMKVITELLAGGTAADRVNPPLS* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00119 233 MobiDBLite consensus disorder prediction 31 46 - -
Pte15g00119 233 MobiDBLite consensus disorder prediction 27 56 - -
Pte15g00119 233 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 61 219 IPR044660 GO:0006355
Pte15g00119 233 CDD bHLH_AtIBH1_like 159 216 IPR044549 GO:0006355
Pte15g00119 233 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 205 IPR011598 GO:0046983
Pte15g00119 233 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 171 221 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00119 Pte-Chr15 925731 926432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00119 58 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 46.951 9.26e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00119 - - qsa:O6P43_007418 174.866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g02009 18 30507130 30508360 Pte15g00119 15 925731 926432 RCT
Pte15g00119 15 925731 926432 Pte15g00119 15 925731 926432 RCT