Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00117 ATGGTGAATCAACAAGAGCAACTTGTACAAAAGGTCTGTCATTTGTTTCAGCAAATCTCAAGCCTCGAGAATCTTAAACCCTCCAAAGATGTCAACATGCTTTTCACACAACTTGTACTCACTTGCATGCCACCTTGTCCAATTGATGTTGCCAAGCTCAGCAAAAGGGTTCAACAGATGAGAAGCAAGCTCATAAGACTGTGTGGAGAAGCCGAAGGACTTTTAGAGAGTCATTACTCTGACATCCTTGGGTCTTACCAGAATCCTCTTCATCATCTCAACCTTTTCCCTTACTATTCAAATTACCTTAAACTCGGTTTTCTCGAGTTCACAATTCTTAGTCAGCACTGTGCTCATGTCCCTAGCAAAATTGCCTTTGTGGGATCCGGCCCTCTTCCCTTCACTTCGATCGTCTTGGCAACCCAGCACCTCACATCCACCATCTTCCACAACTATGACATCGACCCTTCAGCCAATTCACAGGCACTTCGCTTAGTTTCCTCCGATCCGGACCTATCGAAAAGGATGATTTTCCACACCACTGACATAATGAAGGTCACGACTGCTTTGAAAGACTACAATGTTGTTTTTTTAGCAGCGCTTGTGGGCATGGATATGGAGGTCAAGATTCGAATCATTGATCATCTGGCGAAGCACATGGCACCTGGAGCACTTTTGATGCTCAGGAGTGCACACGGTGCTCGGGCTTTTCTTTATCCAGTGGTCGATCCATGTGATCTTCGAGGGTTTGACGTGCTGTCTGTGTTTCACCCTACGGATGAGGTTATCAATTCTGTTGTGATCGCACGCAAGTATTCCGCAATTCCAACGAAACATTCAAAGCTTGACCAACAGCATCAGCAAGATTGGAAGATGCAGGCTACTAATACATCTACAGATTCTCAACCAATGCTTGCTAGGGAAATAGGCAACGGGGTAATGAAGTCAACTGGTGTGAATGAGAAGGCTTTCTCAGATGGAGGGTTGCAGGGTTCTCGGCGAGATGTACTGAGATATGGAAGTCTGGGTGTTGCTATCTCCTGTTTTCTCTTCACCATCTCAAACTGGAAGGCTATGCAATATGCTTCTCCTAAAGCTATTTGGAATAGTTTGTTGGGCGTGAGCCAATTATCATTTAAAGACAACGAAGATAATTCAAGAAATGCAAGAATTCAAAGATTTGTGAACTACATATCTGATATTGAAGCCAGGTAA 1215 0.4412 MVNQQEQLVQKVCHLFQQISSLENLKPSKDVNMLFTQLVLTCMPPCPIDVAKLSKRVQQMRSKLIRLCGEAEGLLESHYSDILGSYQNPLHHLNLFPYYSNYLKLGFLEFTILSQHCAHVPSKIAFVGSGPLPFTSIVLATQHLTSTIFHNYDIDPSANSQALRLVSSDPDLSKRMIFHTTDIMKVTTALKDYNVVFLAALVGMDMEVKIRIIDHLAKHMAPGALLMLRSAHGARAFLYPVVDPCDLRGFDVLSVFHPTDEVINSVVIARKYSAIPTKHSKLDQQHQQDWKMQATNTSTDSQPMLAREIGNGVMKSTGVNEKAFSDGGLQGSRRDVLRYGSLGVAISCFLFTISNWKAMQYASPKAIWNSLLGVSQLSFKDNEDNSRNARIQRFVNYISDIEAR* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00117 404 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
Pte15g00117 404 PANTHER NICOTIANAMINE SYNTHASE 3 3 296 IPR004298 GO:0030410|GO:0030418
Pte15g00117 404 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Pte15g00117 404 Pfam Nicotianamine synthase protein 3 273 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00117 Pte-Chr15 905812 909333 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00117 4 284 Nicotianamine Synthase Gene Family AT1G56430 65.035 1.21e-135 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00117 K05953 - qsa:O6P43_011034 458.373