Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00116 ATGGTGAATCAACAAGAGCAACTTGTACAAAAGATCTGTGATTTGTTTGAGCAAATCTCAAGCCTCGAGAGTCTGAAACCCTCCAAAGATGTCAACATGGTTTTCACTCAGCTTGTACTCACATGCATGCCACCTTGTCCAATTGACGTTGCCAAGCTGAGCAAAAGGGTCCAAGATATGAGAAGCAAGCTCATAAGACTGTGCGGAGAAGCTGAAGGACTTTTAGAGAGTCATTACTCTGACATCCTTGGGTCTTACCAGAATCCTCTTCGCCATCTCACCCTTTTTCCTTACTATTCAAATTACCTCAAACTCGGTTTCCTCGAGTTCACAATTCTTAGTCAGCACTGTGCTCATGTCCCTAGCAAAATTGCCTTTGTGGGATCCGGCCCTCTTCCCTTCACTTCGATCGTCTTGGCAACCCAGCACCTCACATCCACTATCTTCCACAACTATGACATCGACCCTTCAGCCAATTCACAGGCACTTCGCTTAGTTTCCTCCGATCCGGACCTCTCGGAAAGGATGATTTTCCATACCGCTGACATAATGAACGTCACGACTGCTTTGAAAGACTACGATGTTGTTTTCTTAGCCGCGCTTGTGGGCATGGATATGGAGGTCAAGATTCGAATCATTGATCATCTGGCGAAGCACATGGCTCCTGGAGCACTTTTGATGCTCAGGAGTGCACACGGTGCTCGGGCTTTTCTTTATCCAGTGGTTGATCCATGTGATCTTCGAGGGTTTGACGTGCTGTCTGTGTTTCACCCTACGGATGAGGTCATTAATTCTGTTGTGATCGCACGTAAGTTTTTGACAATCCCAATGAAACAATTACAGCTTGATCAACAACATCAAGGGCACGCTTCCCTGAAATCTCTGAACAAGGGTTCTGAACTTGAAGCCTTCATTCCTCTCAACCGCGGGAACATGATTGAGGAGGTTGCAGTTCAGGAGTGA 963 0.4642 MVNQQEQLVQKICDLFEQISSLESLKPSKDVNMVFTQLVLTCMPPCPIDVAKLSKRVQDMRSKLIRLCGEAEGLLESHYSDILGSYQNPLRHLTLFPYYSNYLKLGFLEFTILSQHCAHVPSKIAFVGSGPLPFTSIVLATQHLTSTIFHNYDIDPSANSQALRLVSSDPDLSERMIFHTADIMNVTTALKDYDVVFLAALVGMDMEVKIRIIDHLAKHMAPGALLMLRSAHGARAFLYPVVDPCDLRGFDVLSVFHPTDEVINSVVIARKFLTIPMKQLQLDQQHQGHASLKSLNKGSELEAFIPLNRGNMIEEVAVQE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00116 320 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Pte15g00116 320 PANTHER NICOTIANAMINE SYNTHASE 3 3 285 IPR004298 GO:0030410|GO:0030418
Pte15g00116 320 Pfam Nicotianamine synthase protein 3 272 IPR004298 GO:0030410|GO:0030418
Pte15g00116 320 Gene3D Vaccinia Virus protein VP39 6 272 IPR029063 -
Pte15g00116 320 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 232 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00116 Pte-Chr15 887056 888510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00116 4 320 Nicotianamine Synthase Gene Family AT1G09240 60.938 1.61e-136 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00116 K05953 - qsa:O6P43_007426 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00116 15 887056 888510 Pte15g00116 15 887056 888510 RCT