Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00109 ATGGATCGGGAAGGAGGATCCGACGGCGGATCTTGCTACTACTCCATTCTTGGGATACGCAGGGACGCCTCCTTTTCCGATGTCCGCACTGCTTACCGTAAGCTCGCCATGAGATGGCACCCGGACAAATGGGCTAGGAATCCATCGGTAGCCGGAGAGGCTAAAAGGCGGTTTCAGCAAATCCAAGAAGCATATTCAGTTCTCTCGGATCAAGCTAAGCGGTCAATGTACGATGCCGGGATGTATGATCCTTTGGAGGAAGAAGACGAGGAATTCTGTGACTTTATGCAAGAAATGATATCCATGATGAACAACGTGAAAGATGAGGGGGCCAACAGCTTTGAAGATCTACAGAGGATGTTTGTGGAGATGGTTGGTGGAGATGGCATCCACTTTGACCTTAAAGAGGATCCACCGGCGGGCAAGAGACCACGTGCCGGCAATGCAAAGAGAAGTAATTGTCGTTGTTAA 471 0.4989 MDREGGSDGGSCYYSILGIRRDASFSDVRTAYRKLAMRWHPDKWARNPSVAGEAKRRFQQIQEAYSVLSDQAKRSMYDAGMYDPLEEEDEEFCDFMQEMISMMNNVKDEGANSFEDLQRMFVEMVGGDGIHFDLKEDPPAGKRPRAGNAKRSNCRC* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00109 156 SMART dnaj_3 11 73 IPR001623 -
Pte15g00109 156 Pfam DnaJ domain 13 78 IPR001623 -
Pte15g00109 156 SUPERFAMILY Chaperone J-domain 12 84 IPR036869 -
Pte15g00109 156 Gene3D DnaJ domain 11 133 IPR036869 -
Pte15g00109 156 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pte15g00109 156 PRINTS DnaJ domain signature 14 32 IPR001623 -
Pte15g00109 156 PRINTS DnaJ domain signature 32 47 IPR001623 -
Pte15g00109 156 PANTHER PUTATIVE, EXPRESSED-RELATED 8 130 - -
Pte15g00109 156 CDD DnaJ 12 70 IPR001623 -
Pte15g00109 156 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Pte15g00109 156 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Pte15g00109 156 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00109 Pte-Chr15 835188 836863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00109 12 79 C2H2 Transcription Factor Family AT1G74250 40.580 1.85e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00109 - - pop:18098616 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00109 15 835188 836863 Pte15g00109 15 835188 836863 RCT