Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00100 ATGATTCTGGAAGGCTTATGTTTCATTCACAGCAGGGGTTACGTTCATTGTGATCTGAAACCTGGGAATATCCTTGTGTTCACTTCCGAAGATGATCATACCGATGGTTGGGTGGAGAACTATAACTTGAAGCTTGCAGATTTTGGACTCGTTAAGGAACCTTACCTACATACAGACGACATCACGTTCAATGAATTCCGTGGAACGCCAGATTACATGTCCCCAATTAAGCCATCGCATAAGATATTCGTTCCTATTTATATTGTACGTGATCAGATCAACCATGTATATAGACGATAG 300 0.41 MILEGLCFIHSRGYVHCDLKPGNILVFTSEDDHTDGWVENYNLKLADFGLVKEPYLHTDDITFNEFRGTPDYMSPIKPSHKIFVPIYIVRDQINHVYRR* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00100 99 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 75 - -
Pte15g00100 99 Pfam Protein kinase domain 2 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00100 99 ProSiteProfiles Protein kinase domain profile. 1 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00100 99 SUPERFAMILY Protein kinase-like (PK-like) 2 75 IPR011009 -
Pte15g00100 99 Gene3D Transferase(Phosphotransferase) domain 1 1 82 - -
Pte15g00100 99 ProSitePatterns Serine/Threonine protein kinases active-site signature. 14 26 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00100 Pte-Chr15 751426 752816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00100 2 83 MAP Kinase Kinase Kinase AT4G36950 39.024 5.66e-12 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte15g00100 Pkinase 4.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00100 - - qsa:O6P43_026965 79.7221