Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00099 ATGTCGGGAGTCGGTGATCCCTCTCAGAAAAGGAAGAGAATAACGGTTATCGTCGTCTCTTCCTTCTTGCTGGTTGGCATGGTGGTTGCCGTCACCGTTGGTTTTACCCTCTCGCAAAAAGATGACTCCAATGGTTCTAATGGGCCTTCCACATCCATGAAAGCAATCAAAAGCATTTGCCACAACACAGAGTACAGAAAAGAATGTGTTCATAGCTTAGAGAAAGAGGCTGGCAACGCCACTGAGCCTATAGACCTAATCAAGGCTGCATTCAGATCAGCAAAGAAGAAAATCCAGGAGGGAGCACGTAAGTCAGTCACTATCCAAGAGCTTGCCAAAGATCCCTTAACCAGGATGGCTCTTGAGCAATGCGCGGAGCTTGCCAATATGTCTATTTCTGAGCTCGAGCGTTCTGTCGAGAAAATGGTTAACTTCGATTACACCAAAATCGATGAAAGTTTGCTGGATTTGAAGACTTGGCTCAGTGCCGCCTACACATACCAAAGTACTTGCCTTGATGGATTTGAAGGCACCACAGGTGATGCCTCAAAGAAAATGAAAGCCGCCTTGAAATCAGCCATGGAGATGACCACCAATGGCGTTACCATGGTCTCCGAAATGCATAAAGCCTTGAACGAATACAACATTACCAGCATGGCTGGCCGCCGTCGTCTCCTTGATGATGAAGATGATGACGAAGATGCAGTACCTATCGTGGGACATGAACAACTTTTTCCTTCCTGGGTTGATAAAGGCACGAGGAGACTCCTCGTCGCTGAATATGCTTTACATGAGGAGAAGCCGGACATAGTTGTGGCCAAGGACGGTAGTGGAAAATTCAAGACCATCAACGCCGCAATCAAATCCATCCCAAAAAAGAGAACACCTGGCAAGCGTTTCATCATTCACATCAAGGAGGGTGTCTACAGGGAGCAGGGAAGGCAGAAGAGCAATGAGCCAACCGCCATTGTCCTCCAAGACAAATCTAAACGTGTGAAATGGCCTGGAATCAGAAGCATCACCTCGCAAAGTGCTGAGAAGTTTACACCACAATTTTACCTTGGGGGTGCTGCTTTTGTTAAGTTGGCCAAAGTGCCTATGAACTCAGGAATGATGCACAAATCCAGTTAG 1131 0.4695 MSGVGDPSQKRKRITVIVVSSFLLVGMVVAVTVGFTLSQKDDSNGSNGPSTSMKAIKSICHNTEYRKECVHSLEKEAGNATEPIDLIKAAFRSAKKKIQEGARKSVTIQELAKDPLTRMALEQCAELANMSISELERSVEKMVNFDYTKIDESLLDLKTWLSAAYTYQSTCLDGFEGTTGDASKKMKAALKSAMEMTTNGVTMVSEMHKALNEYNITSMAGRRRLLDDEDDDEDAVPIVGHEQLFPSWVDKGTRRLLVAEYALHEEKPDIVVAKDGSGKFKTINAAIKSIPKKRTPGKRFIIHIKEGVYREQGRQKSNEPTAIVLQDKSKRVKWPGIRSITSQSAEKFTPQFYLGGAAFVKLAKVPMNSGMMHKSS* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00099 376 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 209 IPR035513 -
Pte15g00099 376 Pfam Pectinesterase 269 314 IPR000070 GO:0030599|GO:0042545
Pte15g00099 376 PANTHER PECTINESTERASE 21 318 - -
Pte15g00099 376 FunFam Pectinesterase 52 208 - -
Pte15g00099 376 CDD PMEI-like_3 58 209 - -
Pte15g00099 376 Pfam Plant invertase/pectin methylesterase inhibitor 55 199 IPR006501 GO:0004857
Pte15g00099 376 NCBIfam pectinesterase inhibitor domain 51 201 IPR006501 GO:0004857
Pte15g00099 376 SMART PMEI_2 51 203 IPR006501 GO:0004857
Pte15g00099 376 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 207 IPR035513 -
Pte15g00099 376 Gene3D - 235 360 IPR012334 -
Pte15g00099 376 SUPERFAMILY Pectin lyase-like 267 312 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00099 Pte-Chr15 743209 745095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00099 3 311 Carbohydrate Esterase AT3G05610 45.161 8.66e-88 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00099 K01051 - qsa:O6P43_011075 306.605