Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00097 ATGGTGGGCTGGGCCACACTTAGCCCATCTTCTTCAGGAGCTTCTTCTTCGTACACTTTTTATAAAGGGATCGATTTGAAGGCCGGAGGTAAGTCCAAGAAGACAAAGAGGACAGCACCCAAGTCCAATGATATCTATCTCAAGCTCTTGGTCAAGCTTTACCGCTTCCTTGTCCGGAGGACTGAGAGCAAGTTTAATGCTGTCATTTTGAAGCGCCTGTTTATGTCAAAAGTCAACAAGCCTCCAATGTCTCTTTCAAGGTTGATCTCTTTGATGAAAGGGAAGGAGGATAAGATCGCTGTAATTGTTGGAAATGTTACGGATGATGTCCGAGTATATGAGGTCCCTGCTCTAAAGGTTACTGCACTTAGGTTTACCGAGACTGCCCGGGCAAGAATTGAGAATGCAGGTGGAGAGTGCTTGACTTTTGATCAGCTTGCTCTTAGGTCACCTCTGGGTCAAAACACGGTTCTGCTGAGGGGTCCCAAGAATGCTCGTGAAGCTGTCAAACACTTTGGTCCTGCTCCCGGTGTCCCTCACAGCCACTCCAAGCCTTATGTGCGCTCAAAGGGAAGGAAGTTTGAGAGGGCAAGAGGAAGGAGAAACAGTAGAGGATTCAGGGTTTAA 627 0.4753 MVGWATLSPSSSGASSSYTFYKGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTESKFNAVILKRLFMSKVNKPPMSLSRLISLMKGKEDKIAVIVGNVTDDVRVYEVPALKVTALRFTETARARIENAGGECLTFDQLALRSPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGRRNSRGFRV* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00097 208 MobiDBLite consensus disorder prediction 172 208 - -
Pte15g00097 208 FunFam 60S ribosomal protein L18 22 208 - -
Pte15g00097 208 SUPERFAMILY Ribosomal proteins L15p and L18e 41 160 IPR036227 -
Pte15g00097 208 MobiDBLite consensus disorder prediction 185 208 - -
Pte15g00097 208 PANTHER 60S RIBOSOMAL PROTEIN L18 23 208 IPR000039 GO:0003735|GO:0005840|GO:0006412
Pte15g00097 208 Gene3D - 22 208 - -
Pte15g00097 208 Pfam Ribosomal protein 60S L18 and 50S L18e 23 208 IPR021131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00097 Pte-Chr15 737027 739064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00097 24 209 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 79.679 4.79e-104 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00097 K02883 - gmx:100500164 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00097 15 737027 739064 Pte15g00097 15 737027 739064 RCT